RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 GPNMBQ14956 572 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TRADDQ15628 312 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 LIN9Q5TKA1 542 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 RFFLQ8WZ73 363 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 ALG3Q92685 438 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SYN2Q92777 582 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 BHMTQ93088 406 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 TRIM43Q96BQ3 446 aaPredicted RBP10.28□□□□□ -0.76
SMPD4-203ENST00000412570 CALN1Q9BXU9 219 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 DPH5Q9H2P9 285 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
SMPD4-203ENST00000412570 SCN10AQ9Y5Y9 1956 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 XPOTO43592 962 aaKnown RBP10.27□□□□□ -0.76
SMPD4-203ENST00000412570 AP1G2O75843 785 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 GNRH1P01148 92 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 ADIGQ0VDE8 80 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 LONRF2Q1L5Z9 754 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.76
SMPD4-203ENST00000412570 SCAMP5Q8TAC9 235 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 MICAL1Q8TDZ2 1067 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 GIPC2Q8TF65 315 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 C1orf54Q8WWF1 131 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 BADQ92934 168 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 C18orf8Q96DM3 657 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 YME1L1Q96TA2 773 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 GPR62Q9BZJ7 368 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 C11orf49Q9H6J7 331 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 SAGE1Q9NXZ1 904 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 CNTN3Q9P232 1028 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 PCDHGC5Q9Y5F6 944 aa10.27□□□□□ -0.76
SMPD4-203ENST00000412570 CD4P01730 458 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 USP17L7P0C7H9 530 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 KRT3P12035 628 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 GRIK1P39086 918 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 PAFAH1B1P43034 410 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 BPIFB4P59827 614 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 PITX1P78337 314 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 POU5F1BQ06416 359 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 OVOS1Q6IE37 1185 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 KBTBD7Q8WVZ9 684 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 ZNF560Q96MR9 790 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 CXXC1Q9P0U4 656 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 CDC23Q9UJX2 597 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 NR2E3Q9Y5X4 410 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 LRRD1A4D1F6 860 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 DYNC1I1O14576 645 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 MOCS2O96007 188 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 MYOGP15173 224 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 TNNT3P45378 269 aaPredicted RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 CLDN10P78369 228 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 SV2CQ496J9 727 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 NECAB2Q7Z6G3 386 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 DDX42Q86XP3 938 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 OLIG1Q8TAK6 271 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 URGCPQ8TCY9 931 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 PGBD4Q96DM1 585 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 IQCDQ96DY2 449 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 RBM12Q9NTZ6 932 aaKnown RBP10.27□□□□□ -0.77
SMPD4-203ENST00000412570 MRFAP1Q9Y605 127 aa10.27□□□□□ -0.77
SMPD4-203ENST00000412570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 CAPN9O14815 690 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 CLTBP09497 229 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 AXLP30530 894 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 AP3M2P53677 418 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 TAS2R40P59535 323 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 OGDHQ02218 1023 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 BTG3Q14201 252 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 B3GALNT2Q8NCR0 500 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 PCED1BQ96HM7 432 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 PPP1R10Q96QC0 940 aaKnown RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 LRRC4Q9HBW1 653 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 TMEM30AQ9NV96 361 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 JRKLQ9Y4A0 524 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 NRP1O14786 923 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 FLT3P36888 993 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 CDK17Q00537 523 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 MGAT5BQ3V5L5 792 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 DCAF6Q58WW2 860 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 FAM183BPQ6ZVS7 135 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 LRRTM3Q86VH5 581 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 MYRIPQ8NFW9 859 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 CXorf38Q8TB03 319 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 IPO4Q8TEX9 1081 aaKnown RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 RNF34Q969K3 372 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 SCN5AQ14524 2016 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 C9IYK1 514 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 KIF2AO00139 706 aaPredicted RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 KRIT1O00522 736 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 TMEM253P0C7T8 217 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 PDGFRAP16234 1089 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 PTPN1P18031 435 aaKnown RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 FECHP22830 423 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 ALDH7A1P49419 539 aaKnown RBP10.26□□□□□ -0.77
SMPD4-203ENST00000412570 NRLP54845 237 aa10.26□□□□□ -0.77
SMPD4-203ENST00000412570 PDCLQ13371 301 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms