RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 ITGA11Q9UKX5 1188 aa17.72■□□□□ 0.43
SCAMP4-203ENST00000411971 ANTXRLA6NF34 631 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 HUS1O60921 280 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 NOL4O94818 638 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 CST3P01034 146 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 FOXK2Q01167 660 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 TSPY1Q01534 308 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 EHHADHQ08426 723 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 ALCAMQ13740 583 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 CCDC65Q8IXS2 484 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 EZH1Q92800 747 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 DHX58Q96C10 678 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 IER2Q9BTL4 223 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 FAM126AQ9BYI3 521 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 TMEM30AQ9NV96 361 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 HSPBP1Q9NZL4 362 aa17.71■□□□□ 0.43
SCAMP4-203ENST00000411971 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 RBP5P82980 135 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 ZXDBP98169 803 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 PKP1Q13835 747 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TAF12Q16514 161 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 NFE2Q16621 373 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 ITPRIPL2Q3MIP1 535 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 DGLUCYQ7Z3D6 616 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 MON1AQ86VX9 555 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TMEM86AQ8N2M4 240 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TOP6BLQ8N6T0 577 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 RDH13Q8NBN7 331 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 PLEKHO2Q8TD55 490 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF516Q92618 1163 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 GCNAQ96QF7 691 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 BLZF1Q9H2G9 400 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TMEM206Q9H813 350 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 TDP1Q9NUW8 608 aa17.7■□□□□ 0.42
SCAMP4-203ENST00000411971 C2orf78A6NCI8 922 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 CLIC2O15247 247 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 PPP6R2O75170 966 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 PAPSS2O95340 614 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 CSH1P0DML2 217 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 CSH2P0DML3 217 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 PXNP49023 591 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 CACNA2D1P54289 1103 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 USP46P62068 366 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 ASIC1P78348 528 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 SPEM2Q0P670 501 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 RUNX3Q13761 415 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 LRRC32Q14392 662 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 PUM1Q14671 1186 aaKnown RBP eCLIP17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 TMEM196Q5HYL7 178 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 SCN4BQ8IWT1 228 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 NELFCDQ8IXH7 590 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 SCFD1Q8WVM8 642 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 MYLPFQ96A32 169 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 ELMO3Q96BJ8 720 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 MSANTD3Q96H12 275 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 MRPL45Q9BRJ2 306 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 ABCB6Q9NP58 842 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 AGPAT3Q9NRZ7 376 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 GCNT4Q9P109 453 aa17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-203ENST00000411971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 EGFP01133 1207 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 PDGFRBP09619 1106 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 AVPR1AP37288 418 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 ATXN1P54253 815 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 MYL7Q01449 175 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF77Q15935 545 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 DGKKQ5KSL6 1271 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 CNNM4Q6P4Q7 775 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 PRR23BQ6ZRT6 265 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 TRAPPC11Q7Z392 1133 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 TRMT2BQ96GJ1 504 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 ANKRD36BP1Q96IX9 119 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 C7orf25Q9BPX7 421 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 SYT15Q9BQS2 421 aa17.68■□□□□ 0.42
SCAMP4-203ENST00000411971 LAMA1P25391 3075 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 CUTAO60888 179 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 BDNFP23560 247 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 NRLP54845 237 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 USP4Q13107 963 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 FAM26FQ5R3K3 315 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 SPATA2LQ8IUW3 424 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 ARL14EPQ8N8R7 260 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 MRPS31Q92665 395 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 DPEP3Q9H4B8 488 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 TRPC7Q9HCX4 862 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 PCDHA7Q9UN72 937 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 WNT6Q9Y6F9 365 aa17.67■□□□□ 0.42
SCAMP4-203ENST00000411971 TRDMT1O14717 391 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms