RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CCDC127Q96BQ5 260 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 MMS19Q96T76 1030 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 PKMYT1Q99640 499 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 SYT15Q9BQS2 421 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 UXTQ9UBK9 157 aaPredicted RBP23.92■■□□□ 1.42
MSH6-202ENST00000411819 MYBPHLA2RUH7 354 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 GABRDO14764 452 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 CHRNB1P11230 501 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 DDX6P26196 483 aaKnown RBP eCLIP23.91■■□□□ 1.42
MSH6-202ENST00000411819 CTHP32929 405 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 TNK2Q07912 1038 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 EHHADHQ08426 723 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 PPP2R5DQ14738 602 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 TXNDC8Q6A555 127 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 DPH6Q7L8W6 267 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 TRAPPC11Q7Z392 1133 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 RALGPS2Q86X27 583 aaPredicted RBP23.91■■□□□ 1.42
MSH6-202ENST00000411819 KBTBD7Q8WVZ9 684 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 RUBCNQ92622 972 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 CGRRF1Q99675 332 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 RBM12Q9NTZ6 932 aaKnown RBP23.91■■□□□ 1.42
MSH6-202ENST00000411819 SPTBN4Q9H254 2564 aa23.91■■□□□ 1.42
MSH6-202ENST00000411819 CCR3P51677 355 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 CYP24A1Q07973 514 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 PSMD6Q15008 389 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 CFAP221Q4G0U5 840 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 TXNDC11Q6PKC3 985 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 C4orf50Q6ZRC1 276 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 KIAA2013Q8IYS2 634 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 SUMF1Q8NBK3 374 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 ZBTB44Q8NCP5 570 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 FUBP3Q96I24 572 aaKnown RBP eCLIP23.9■■□□□ 1.42
MSH6-202ENST00000411819 TRPC7Q9HCX4 862 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 SERTAD1Q9UHV2 236 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 CDH9Q9ULB4 789 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 CCL26Q9Y258 94 aa23.9■■□□□ 1.42
MSH6-202ENST00000411819 OTOGLQ3ZCN5 2332 aa23.89■■□□□ 1.42
MSH6-202ENST00000411819 PVALEFA0A1B0GWK0 134 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 ATP2C2O75185 946 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 NOL4O94818 638 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 CLSTN1O94985 981 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 SNRPFP62306 86 aaKnown RBP23.89■■□□□ 1.41
MSH6-202ENST00000411819 PON2Q15165 354 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 TTC16Q8NEE8 873 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 USP13Q92995 863 aaPredicted RBP23.89■■□□□ 1.41
MSH6-202ENST00000411819 MYLPFQ96A32 169 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 KIF9Q9HAQ2 790 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 TDP1Q9NUW8 608 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 NCDNQ9UBB6 729 aa23.89■■□□□ 1.41
MSH6-202ENST00000411819 TADA3O75528 432 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 PDGFRBP09619 1106 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 WARSP23381 471 aaKnown RBP23.88■■□□□ 1.41
MSH6-202ENST00000411819 LMO2P25791 158 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 BMT2Q1RMZ1 405 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 ITPRIPL2Q3MIP1 535 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 DCLK2Q8N568 766 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 TRMT2BQ96GJ1 504 aaKnown RBP23.88■■□□□ 1.41
MSH6-202ENST00000411819 FAM126AQ9BYI3 521 aaPredicted RBP23.88■■□□□ 1.41
MSH6-202ENST00000411819 GKN1Q9NS71 199 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 EXOC1Q9NV70 894 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 MAGEC2Q9UBF1 373 aaPredicted RBP23.88■■□□□ 1.41
MSH6-202ENST00000411819 SMG5Q9UPR3 1016 aaKnown RBP23.88■■□□□ 1.41
MSH6-202ENST00000411819 PTPRDP23468 1912 aa23.88■■□□□ 1.41
MSH6-202ENST00000411819 EXOC3O60645 756 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 ID4P47928 161 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 CXCL12P48061 93 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 TNNC1P63316 161 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 SATB1Q01826 763 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 CYP27A1Q02318 531 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 TRPC3Q13507 836 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 MAPRE1Q15691 268 aaKnown RBP23.87■■□□□ 1.41
MSH6-202ENST00000411819 KNOP1Q1ED39 458 aaKnown RBP23.87■■□□□ 1.41
MSH6-202ENST00000411819 FAM171BQ6P995 826 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 Q6ZS52 159 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 LIMS2Q7Z4I7 341 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 MON1AQ86VX9 555 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 NELL1Q92832 810 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 SNX25Q9H3E2 840 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 CRTAC1Q9NQ79 661 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 CGNQ9P2M7 1197 aaKnown RBP23.87■■□□□ 1.41
MSH6-202ENST00000411819 RCOR1Q9UKL0 485 aa23.87■■□□□ 1.41
MSH6-202ENST00000411819 GREB1Q4ZG55 1949 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 LILRB5O75023 590 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 CST3P01034 146 aaPredicted RBP23.86■■□□□ 1.41
MSH6-202ENST00000411819 SLFN14P0C7P3 912 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 BDNFP23560 247 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 MAGEA11P43364 429 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 NRLP54845 237 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 GAS6Q14393 721 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 DGKKQ5KSL6 1271 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 TRIM68Q6AZZ1 485 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 CC2D1AQ6P1N0 951 aaPredicted RBP23.86■■□□□ 1.41
MSH6-202ENST00000411819 SPEM1Q8N4L4 309 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 OR6B3Q8NGW1 331 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 MRPL45Q9BRJ2 306 aaKnown RBP23.86■■□□□ 1.41
MSH6-202ENST00000411819 EPC1Q9H2F5 836 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 EBF3Q9H4W6 596 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 ANAPC1Q9H1A4 1944 aa23.86■■□□□ 1.41
MSH6-202ENST00000411819 GPR179Q6PRD1 2367 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 SOBPA7XYQ1 873 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms