RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 PIGBOS1A0A0B4J2F0 54 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NR5A2O00482 541 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KCNQ3O43525 872 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 AKAP10O43572 662 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 VAMP4O75379 141 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PRKAR1AP10644 381 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CYP2C18P33260 490 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZAP70P43403 619 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NAGLUP54802 743 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EEF1A1P68104 462 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CDKL1Q00532 357 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KPNB1Q14974 876 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PCK2Q16822 640 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 BEND3Q5T5X7 828 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EEF1A1P5Q5VTE0 462 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL23Q8NBE8 558 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EME1Q96AY2 570 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 HIC2Q96JB3 615 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NOL11Q9H8H0 719 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 UXTQ9UBK9 157 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 AASSQ9UDR5 926 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZRANB1Q9UGI0 708 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SRRDQ9UH36 339 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MAST3O60307 1309 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ITIH6Q6UXX5 1313 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KDM3AQ9Y4C1 1321 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MAGEB2O15479 319 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ACSL4O60488 711 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 OR6A2O95222 327 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SLC2A2P11168 524 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 XIAPP98170 497 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CHRNB3Q05901 458 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CYP24A1Q07973 514 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL22Q53GT1 634 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ERAP2Q6P179 960 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TTC33Q6PID6 262 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 DPY19L4Q7Z388 723 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FERMT3Q86UX7 667 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF713Q8N859 430 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FAM13CQ8NE31 585 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NEK7Q8TDX7 302 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 C7orf50Q9BRJ6 194 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CNPPD1Q9BV87 410 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF471Q9BX82 626 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FSD1LQ9BXM9 530 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 BLZF1Q9H2G9 400 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NELFAQ9H3P2 528 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MYNNQ9NPC7 610 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ECHDC1Q9NTX5 307 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRMT112Q9UI30 125 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SOS2Q07890 1332 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TTC21BQ7Z4L5 1316 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ATXN2Q99700 1313 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC85CA6NKD9 419 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FAM220BPB1ANY3 271 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PLIN3O60664 434 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GAS7O60861 476 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 HMBSP08397 361 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PET100P0DJ07 73 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TNNI1P19237 187 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MATKP42679 507 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SLC9A3P48764 834 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SKP1P63208 163 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RAB35Q15286 201 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PCID2Q5JVF3 399 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 DENND5AQ6IQ26 1287 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KIAA1841Q6NSI8 718 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRIM65Q6PJ69 517 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TGFBRAP1Q8WUH2 860 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PPP2R3CQ969Q6 453 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RTKNQ9BST9 563 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZYG11BQ9C0D3 744 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 VPS33BQ9H267 617 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GOLPH3Q9H4A6 298 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ENY2Q9NPA8 101 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SEC31BQ9NQW1 1179 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PCDH10Q9P2E7 1040 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MYRFQ9Y2G1 1151 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MROH7-TTC4A0A0A0MT08 1334 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MROH7Q68CQ1 1323 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EXOC1LA0A1B0GW35 172 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC154A6NI56 674 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CABYRO75952 493 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RAB36O95755 333 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PABPC1P11940 636 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SRCP12931 536 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RPA1P27694 616 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ALDH1B1P30837 517 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GRK5P34947 590 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ALDH3B1P43353 468 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CRKP46108 304 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 OMPP47874 163 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EPHB4P54760 987 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CDH4P55283 916 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TFDP1Q14186 410 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRIP10Q15642 601 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF174Q15697 407 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FAM187BQ17R55 369 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 INSCQ1MX18 579 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms