RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
NEDD1-202ENST00000411739 TRIOO75962 3097 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 MOSPD3O75425 235 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 LAMP2P13473 410 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
NEDD1-202ENST00000411739 GRIK1P39086 918 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
NEDD1-202ENST00000411739 TEAD2Q15562 447 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 TAF12Q16514 161 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 STXBP5Q5T5C0 1151 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 CYP4A22Q5TCH4 519 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 RTL10Q7L3V2 364 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 TMC8Q8IU68 726 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 ZSWIM3Q96MP5 696 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 MED10Q9BTT4 135 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 ELOVL4Q9GZR5 314 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 COQ4Q9Y3A0 265 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 AFPP02771 609 aaKnown RBP12.76□□□□□ -0.37
NEDD1-202ENST00000411739 PRSS36Q5K4E3 855 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 RRAGAQ7L523 313 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 NPAS3Q8IXF0 933 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
NEDD1-202ENST00000411739 PSMG2Q969U7 264 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
NEDD1-202ENST00000411739 DENND4AQ7Z401 1863 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 DOCK8Q8NF50 2099 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 CALCAP01258 141 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 ADORA2BP29275 332 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
NEDD1-202ENST00000411739 SMARCB1Q12824 385 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
NEDD1-202ENST00000411739 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 C4orf50Q6ZRC1 276 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 PAQR9Q6ZVX9 377 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 GAREM2Q75VX8 874 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 SHKBP1Q8TBC3 707 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 KCNK16Q96T55 309 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 KCNK12Q9HB15 430 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
NEDD1-202ENST00000411739 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 NFE2L3Q9Y4A8 694 aa12.75□□□□□ -0.37
NEDD1-202ENST00000411739 F8VP50 259 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 POU2F2P09086 479 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 GABRR2P28476 465 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 CYP4F8P98187 520 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 TYRO3Q06418 890 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 STX1AQ16623 288 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 CFAP221Q4G0U5 840 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 FGF14Q92915 247 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 ATXN3LQ9H3M9 355 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 CILPO75339 1184 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
NEDD1-202ENST00000411739 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
NEDD1-202ENST00000411739 CUL2Q13617 745 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 VEPH1Q14D04 833 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 KXD1Q9BQD3 176 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 SLITRK6Q9H5Y7 841 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 CYP3A43Q9HB55 503 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 FANCLQ9NW38 375 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 HSFX1Q9UBD0 423 aa12.74□□□□□ -0.37
NEDD1-202ENST00000411739 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 PES1O00541 588 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 NARSO43776 548 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 BEST1O76090 585 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 SLC9A1P19634 815 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 USP46P62068 366 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 ITIH5Q86UX2 942 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 HEXIM2Q96MH2 286 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 SYCE3A1L190 88 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 KCNJ18B7U540 433 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 EPHA5P54756 1037 aa12.73□□□□□ -0.37
NEDD1-202ENST00000411739 RPL10AP62906 217 aaKnown RBP12.73□□□□□ -0.37
NEDD1-202ENST00000411739 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms