RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 YAF2Q8IY57 180 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 EXOC8Q8IYI6 725 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF366Q8N895 744 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MDGA1Q8NFP4 955 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 OR2I1PQ8NGU4 316 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PHKBQ93100 1093 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LRRC59Q96AG4 307 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IQCDQ96DY2 449 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MSLNLQ96KJ4 702 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PNKPQ96T60 521 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GPHA2Q96T91 129 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 COLEC11Q9BWP8 271 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ENKD1Q9H0I2 346 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RSAD1Q9HA92 442 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLAMF7Q9NQ25 335 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TESQ9UGI8 421 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DDX20Q9UHI6 824 aaKnown RBP3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CPA4Q9UI42 421 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PHTF1Q9UMS5 762 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATP11BQ9Y2G3 1177 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SIK3Q9Y2K2 1263 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TMX2Q9Y320 296 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ACTL7AQ9Y615 435 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KANK1Q14678 1352 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PIK3R4Q99570 1358 aa3.12□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DNMT1P26358 1616 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ARHGAP31Q2M1Z3 1444 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CAMSAP2Q08AD1 1489 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NCOA2Q15596 1464 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 hCG_1642624A0A1W2PR95 340 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MYADML2A6NDP7 307 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF785A8K8V0 405 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 F2RL2O00254 374 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HNRNPDLO14979 420 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TRIM24O15164 1050 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCP110O43303 1012 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLC43A1O75387 559 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ERN1O75460 977 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LDHAP00338 332 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FOSP01100 380 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GJB1P08034 283 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATXN1LP0C7T5 689 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HOXB6P17509 224 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TM4SF4P48230 202 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MAN2A2P49641 1150 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CLK3P49761 638 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SCNN1GP51170 649 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NEK3P51956 506 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ARFIP2P53365 341 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NOMO3P69849 1222 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SLC13A2Q13183 592 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DAG1Q14118 895 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 UBXN2BQ14CS0 331 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PTPAQ15257 358 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 INSCQ1MX18 579 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GRAMD1BQ3KR37 738 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MGAT5BQ3V5L5 792 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PREPLQ4J6C6 727 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IL31Q6EBC2 164 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SFRP4Q6FHJ7 346 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PGBD2Q6P3X8 592 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MZT2AQ6P582 158 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 C1orf228Q6PIY5 440 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 USP17L6PQ6QN14 398 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TOGARAM2Q6ZUX3 1019 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RFX8Q6ZV50 586 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MORC1Q86VD1 984 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 KRT73Q86Y46 540 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FAM90A1Q86YD7 464 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GPR135Q8IZ08 494 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CCDC33Q8N5R6 958 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 OR10H5Q8NGA6 315 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 IL31RAQ8NI17 732 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DEPTORQ8TB45 409 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATXN2LQ8WWM7 1075 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 BRI3BPQ8WY22 251 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CFHR4Q92496 578 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SMG7Q92540 1137 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ANKS1AQ92625 1134 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PMM1Q92871 262 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NMD3Q96D46 503 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZNF668Q96K58 619 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PPP1R9BQ96SB3 815 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MLST8Q9BVC4 326 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 C22orf23Q9BZE7 217 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MRPL46Q9H2W6 279 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 R3HDMLQ9H3Y0 253 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 LDAHQ9H6V9 325 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ZMAT3Q9HA38 289 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CERS4Q9HA82 394 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PLCB1Q9NQ66 1216 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 A1CFQ9NQ94 594 aaKnown RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MAGED2Q9UNF1 606 aaPredicted RBP3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SHOC2Q9UQ13 582 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 DMTF1Q9Y222 760 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RIPOR2Q9Y4F9 1068 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PCDHA1Q9Y5I3 950 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SAMD9LQ8IVG5 1584 aa3.11□□□□□ -1.91
RNU6-1140P-201ENST00000410517 VWDEQ8N2E2 1590 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms