RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 CMASQ8NFW8 434 aaPredicted RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ZSCAN18Q8TBC5 510 aaPredicted RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 SLC20A1Q8WUM9 679 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ZNF606Q8WXB4 792 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 AZIN2Q96A70 460 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 HPDLQ96IR7 371 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 LMLNQ96KR4 655 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 TSGA10Q9BZW7 698 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 CALCOCO1Q9P1Z2 691 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 GRID2IPA4D2P6 1211 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 PODXLO00592 558 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ERLIN2O94905 339 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 GJB5O95377 273 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ITGB3P05106 788 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ITGA4P13612 1032 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 KRT9P35527 623 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 LHX1P48742 406 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 AIF1P55008 147 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ERVK-21P61565 698 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 YWHAEP62258 255 aaKnown RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 CCDC40Q4G0X9 1142 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 TIGD5Q53EQ6 642 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 INTS6LQ5JSJ4 861 aaKnown RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 RSPO2Q6UXX9 243 aaPredicted RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 CATSPER4Q7RTX7 472 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 NT5DC3Q86UY8 548 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ZNF280BQ86YH2 543 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 COLGALT1Q8NBJ5 622 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 C1orf131Q8NDD1 294 aaKnown RBP5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 OR10T2Q8NGX3 314 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 RTP4Q96DX8 246 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 HSFY1Q96LI6 401 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 ADAM2Q99965 735 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 PAAF1Q9BRP4 392 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 B3GNT5Q9BYG0 378 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 SUGCTQ9HAC7 445 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 FAM53CQ9NYF3 392 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 PRKAG3Q9UGI9 489 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 POLIQ9UNA4 740 aa5.17□□□□□ -1.58
R3HDM1-203ENST00000409606 TICRRQ7Z2Z1 1910 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 GOLGA8IPA6NC78 632 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SIGLEC16A6NMB1 481 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 GOLGA8JA6NMD2 632 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 WASH4PA8MWX3 477 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 GOLGA6L6A8MZA4 724 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 INO80B-WBP1J3KQ70 363 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 XPOTO43592 962 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 LPXNO60711 386 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 ITGB1P05556 798 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 THP07101 528 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 EIF4A3P38919 411 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TAF6P49848 677 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 POLR2FP61218 127 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TAP1Q03518 808 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.16□□□□□ -1.587e-11■■■■■ 33.9
R3HDM1-203ENST00000409606 RSRC2Q7L4I2 434 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SLC26A9Q7LBE3 791 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TMEM150AQ86TG1 271 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TPCN2Q8NHX9 752 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TADA1Q96BN2 335 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 ADPGKQ9BRR6 497 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 DUSP16Q9BY84 665 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 KLC2Q9H0B6 622 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 LMAN2LQ9H0V9 348 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TAS2R14Q9NYV8 317 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 PIN4Q9Y237 131 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TP53BP1Q12888 1972 aaPredicted RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 COL27A1Q8IZC6 1860 aaPredicted RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 IGLV3-10A0A075B6K4 115 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 OR6C75A6NL08 312 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 POLR2BP30876 1174 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 PCK1P35558 622 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 MLH1P40692 756 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 MAMLD1Q13495 774 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 RAB33AQ14088 237 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 ARMC3Q5W041 872 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SPOPLQ6IQ16 392 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 PDE12Q6L8Q7 609 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TMC8Q8IU68 726 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SYCP3Q8IZU3 236 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 DBF4BQ8NFT6 615 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TEKT4Q8WW24 435 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TRIM11Q96F44 468 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SLC39A13Q96H72 371 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 IGSF21Q96ID5 467 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 PRMT1Q99873 361 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 FUT8Q9BYC5 575 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 ARHGEF38Q9NXL2 777 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 C2CD4BA6NLJ0 364 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 CCP110O43303 1012 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 CACNG3O60359 315 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 TNNC2P02585 160 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SOD2P04179 222 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 SSBP05455 408 aaKnown RBP eCLIP5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 RB1P06400 928 aa5.16□□□□□ -1.58
R3HDM1-203ENST00000409606 MMEP08473 750 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms