RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 GIPC2Q8TF65 315 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 NVLO15381 856 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 ADCYAP1R1P41586 468 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 CASP4P49662 377 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 SLC12A3P55017 1021 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 GEMIN4P57678 1058 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 C1orf186Q6ZWK4 172 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 TAS1R2Q8TE23 839 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 BLOC1S4Q9NUP1 217 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 PYGLP06737 847 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 CREMQ03060 361 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 ART3Q13508 389 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF268Q14587 947 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 ACAP1Q15027 740 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 OVOS1Q6IE37 1185 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 TAS2R42Q7RTR8 314 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 EPN3Q9H201 632 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 F5H5T6 163 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 MAFO75444 373 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 PSMC6P62333 389 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 YWHAHQ04917 246 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 TBCCQ15814 346 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 SLC9A9Q8IVB4 645 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 UNC45BQ8IWX7 931 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 ROPN1BQ9BZX4 212 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 ROPN1Q9HAT0 212 aaPredicted RBP17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 AIPL1Q9NZN9 384 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
PCDHA13-202ENST00000409494 F8VZ95 297 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 MEFVO15553 781 aaPredicted RBP17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 TUFMP49411 452 aaKnown RBP17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 GEMP55040 296 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 OCRLQ01968 901 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 GLRA4Q5JXX5 417 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 ACOT1Q86TX2 421 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 UNC93AQ86WB7 457 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 CDR2LQ86X02 465 aaPredicted RBP17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 PDCD7Q8N8D1 485 aaKnown RBP17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 TPCN2Q8NHX9 752 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 UXTQ9UBK9 157 aaPredicted RBP17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 NRXN3Q9Y4C0 1643 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 M0QYT0 321 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 MYO1DO94832 1006 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 RCN2Q14257 317 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 DCLK2Q8N568 766 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 SYT15Q9BQS2 421 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 L1RE1Q9UN81 338 aa17.52■□□□□ 0.39
PCDHA13-202ENST00000409494 PLIN4Q96Q06 1357 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 AGTP01019 485 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 MYL6P60660 151 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 TTC17Q96AE7 1141 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 PABPC5Q96DU9 382 aaKnown RBP17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 ZSWIM1Q9BR11 485 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 TFR2Q9UP52 801 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 RTN3O95197 1032 aaPredicted RBP17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 BRAFP15056 766 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 EIF4BP23588 611 aaKnown RBP17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 EPHB2P29323 1055 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 PTGER2P43116 358 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 SH3BGRP55822 239 aaPredicted RBP17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 TRIM15Q9C019 465 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 BRD8Q9H0E9 1235 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 APRTP07741 180 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 GTF2BQ00403 316 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 PTK6Q13882 451 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 IKBKEQ14164 716 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 NDE1Q9NXR1 346 aa17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 NOP53Q9NZM5 478 aaKnown RBP17.51■□□□□ 0.39
PCDHA13-202ENST00000409494 PIK3R2O00459 728 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 POLBP06746 335 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 SPRP35270 261 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 IRAK1P51617 712 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 PREPLQ4J6C6 727 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 DDX53Q86TM3 631 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 HERC6Q8IVU3 1022 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 N4BP2L2Q92802 583 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 EML4Q9HC35 981 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 TRIM66O15016 1216 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 EFCAB14O75071 495 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 HIST1H2AGP0C0S8 130 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 CXCL8P10145 99 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 HIST1H2ADP20671 130 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 NOL9Q5SY16 702 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 SLC13A5Q86YT5 568 aaPredicted RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 HIST1H2AHQ96KK5 128 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 HIST1H2AJQ99878 128 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 H2AFJQ9BTM1 129 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 EMILIN2Q9BXX0 1053 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 UPF3AQ9H1J1 476 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 TLR8Q9NR97 1041 aaKnown RBP17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 IRAK4Q9NWZ3 460 aa17.5■□□□□ 0.39
PCDHA13-202ENST00000409494 ZC3H7BQ9UGR2 993 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms