RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 MIF4GDA9UHW6 222 aaKnown RBP14.86□□□□□ -0.03
GPNMB-203ENST00000409458 GOLGA8SH3BPF8 625 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 MYO1FO00160 1098 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 ATP2C2O75185 946 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 PROSCO94903 275 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 GABRB2P47870 512 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 CFAP221Q4G0U5 840 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 SLC2A14Q8TDB8 520 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 PAWRQ96IZ0 340 aaKnown RBP14.86□□□□□ -0.03
GPNMB-203ENST00000409458 TNIP3Q96KP6 325 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 EPC1Q9H2F5 836 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 SYNCQ9H7C4 482 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 DDX43Q9NXZ2 648 aaKnown RBP14.86□□□□□ -0.03
GPNMB-203ENST00000409458 HESX1Q9UBX0 185 aa14.86□□□□□ -0.03
GPNMB-203ENST00000409458 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 TMEM191CA6NGB0 347 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 E5RJQ4 531 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 PIK3R2O00459 728 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 CEP104O60308 925 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 ODC1P11926 461 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 CTNNA2P26232 953 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 CTNNA1P35221 906 aaKnown RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 PAFAH1B1P43034 410 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 CTCFP49711 727 aaPredicted RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 RGS7P49802 495 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 GATMP50440 423 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 RNASE9P60153 205 aaKnown RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 OGDHQ02218 1023 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 PDE4CQ08493 712 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 DAB2IPQ5VWQ8 1189 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 PMF1Q6P1K2 205 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 DEFB128Q7Z7B8 93 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 COLGALT2Q8IYK4 626 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 UBL4BQ8N7F7 174 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 RPGRIP1Q96KN7 1286 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 SELENOOQ9BVL4 669 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 DNAI2Q9GZS0 605 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 ST7Q9NRC1 585 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 METTL5Q9NRN9 209 aaKnown RBP14.85□□□□□ -0.03
GPNMB-203ENST00000409458 RNF14Q9UBS8 474 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 PCDHB7Q9Y5E2 793 aa14.85□□□□□ -0.03
GPNMB-203ENST00000409458 M0QZQ0 153 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 PARNO95453 639 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CLTBP09497 229 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SETSIPP0DME0 302 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SLC1A1P43005 524 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 LHX1P48742 406 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 PEX5P50542 639 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 BCAT1P54687 386 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 TAP1Q03518 808 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 BST2Q10589 180 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ZNF211Q13398 564 aaPredicted RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 MDH1BQ5I0G3 518 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 DCUN1D2Q6PH85 259 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 DCLRE1AQ6PJP8 1040 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 FAM183BPQ6ZVS7 135 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 RASGEF1CQ8N431 466 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ANKRD52Q8NB46 1076 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 JOSD2Q8TAC2 188 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ACTRT1Q8TDG2 376 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SLC35F5Q8WV83 523 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 RSPH1Q8WYR4 309 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 MCRS1Q96EZ8 462 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 RTP3Q9BQQ7 232 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SYT15Q9BQS2 421 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CARD9Q9H257 536 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CRTAC1Q9NQ79 661 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 WDR35Q9P2L0 1181 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 DNAJB4Q9UDY4 337 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 TTC3P53804 2025 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CCDC66A2RUB6 948 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CYP11A1P05108 521 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 MAN1A1P33908 653 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 RNASELQ05823 741 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ITIH3Q06033 890 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 FAM43BQ6ZT52 329 aaPredicted RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 FUKQ8N0W3 1084 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CRIPAKQ8N1N5 446 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 ANKRD7Q92527 254 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 PIWIL1Q96J94 861 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SUSD3Q96L08 255 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 CASD1Q96PB1 797 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 RBM12Q9NTZ6 932 aaKnown RBP14.84□□□□□ -0.03
GPNMB-203ENST00000409458 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 KANSL3Q9P2N6 904 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 IP6K2Q9UHH9 426 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 LRFN2Q9ULH4 789 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 PCDHA3Q9Y5H8 950 aa14.84□□□□□ -0.03
GPNMB-203ENST00000409458 LTBP2Q14767 1821 aa14.83□□□□□ -0.04
GPNMB-203ENST00000409458 FNDC1Q4ZHG4 1894 aaPredicted RBP14.83□□□□□ -0.04
GPNMB-203ENST00000409458 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.04
GPNMB-203ENST00000409458 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms