RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 CLP1Q92989 425 aaKnown RBP17.84■□□□□ 0.45
SSB-202ENST00000409333 SECISBP2LQ93073 1101 aaKnown RBP17.84■□□□□ 0.45
SSB-202ENST00000409333 PCED1BQ96HM7 432 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 TTPALQ9BTX7 342 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 B3GNT5Q9BYG0 378 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 THAP2Q9H0W7 228 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 TMLHEQ9NVH6 421 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 CEP83Q9Y592 693 aa17.84■□□□□ 0.45
SSB-202ENST00000409333 MYO16Q9Y6X6 1858 aa17.83■□□□□ 0.45
SSB-202ENST00000409333 ANKRD62A6NC57 917 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 ATMINO43313 823 aaPredicted RBP17.83■□□□□ 0.44
SSB-202ENST00000409333 OR4Q2P0C623 313 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 GPD2P43304 727 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 FAM171BQ6P995 826 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 ZNF662Q6ZS27 426 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 MON1BQ7L1V2 547 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 MYLPFQ96A32 169 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 ARHGEF26Q96DR7 871 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 HNRNPABQ99729 332 aaKnown RBP17.83■□□□□ 0.44
SSB-202ENST00000409333 C11orf70Q9BRQ4 267 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 SALL4Q9UJQ4 1053 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 INTUQ9ULD6 942 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 GUCA1BQ9UMX6 200 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 ATG2AQ2TAZ0 1938 aa17.83■□□□□ 0.44
SSB-202ENST00000409333 GREB1Q4ZG55 1949 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 GOLGA6L9A6NEM1 432 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 TULP2O00295 520 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 ZNF500O60304 480 aaPredicted RBP17.82■□□□□ 0.44
SSB-202ENST00000409333 TMEM253P0C7T8 217 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 MYOGP15173 224 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 TSPY1Q01534 308 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 USP41Q3LFD5 358 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 CTXN3Q4LDR2 81 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 ZNF280DQ6N043 979 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 PRSS55Q6UWB4 352 aaPredicted RBP17.82■□□□□ 0.44
SSB-202ENST00000409333 MMS22LQ6ZRQ5 1243 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 PHF13Q86YI8 300 aaPredicted RBP17.82■□□□□ 0.44
SSB-202ENST00000409333 MCOLN2Q8IZK6 566 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 MED10Q9BTT4 135 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 IRX2Q9BZI1 471 aaPredicted RBP17.82■□□□□ 0.44
SSB-202ENST00000409333 ZNF518BQ9C0D4 1074 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 AAASQ9NRG9 546 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 HESX1Q9UBX0 185 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 ZNF638Q14966 1978 aaKnown RBP17.82■□□□□ 0.44
SSB-202ENST00000409333 PDE4DIPQ5VU43 2346 aa17.82■□□□□ 0.44
SSB-202ENST00000409333 MACROD2A1Z1Q3 448 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 KRT86O43790 486 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 SOD2P04179 222 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PPM1AP35813 382 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PDE4CQ08493 712 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PTP4A2Q12974 167 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PDCLQ13371 301 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PTPN20Q4JDL3 420 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 LLGL2Q6P1M3 1020 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 TXLNBQ8N3L3 684 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 ANKRD52Q8NB46 1076 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 CTNNBL1Q8WYA6 563 aaPredicted RBP17.81■□□□□ 0.44
SSB-202ENST00000409333 ZNF653Q96CK0 615 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 RHOBTB2Q9BYZ6 727 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 TSGA10Q9BZW7 698 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 ZCWPW1Q9H0M4 648 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 CHST7Q9NS84 486 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 KRT82Q9NSB4 513 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 TJP2Q9UDY2 1190 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
SSB-202ENST00000409333 MMP8P22894 467 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 BCAT1P54687 386 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PLCB3Q01970 1234 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 SLC39A12Q504Y0 691 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 RSPO2Q6UXX9 243 aaPredicted RBP17.81■□□□□ 0.44
SSB-202ENST00000409333 FAM35AQ86V20 835 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 C16orf45Q96MC5 204 aaPredicted RBP17.81■□□□□ 0.44
SSB-202ENST00000409333 CPXM1Q96SM3 734 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 GDF15Q99988 308 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 UBE2OQ9C0C9 1292 aaKnown RBP17.81■□□□□ 0.44
SSB-202ENST00000409333 ADAM22Q9P0K1 906 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PAXBP1Q9Y5B6 917 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 NCANO14594 1321 aa17.81■□□□□ 0.44
SSB-202ENST00000409333 PLXNA3P51805 1871 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 CDH23Q9H251 3354 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 CARNS1A5YM72 827 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 H0YGN5 161 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 BEST1O76090 585 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 FGF18O76093 207 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 ARHGEF15O94989 841 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 GPC5P78333 572 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 BST2Q10589 180 aaKnown RBP17.8■□□□□ 0.44
SSB-202ENST00000409333 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 NYAP1Q6ZVC0 841 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 ANKS3Q6ZW76 656 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 SPRED2Q7Z698 418 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 PHLDB2Q86SQ0 1253 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 DDX53Q86TM3 631 aaKnown RBP17.8■□□□□ 0.44
SSB-202ENST00000409333 ERICH1Q86X53 443 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 KLHL23Q8NBE8 558 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms