RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 OMDQ99983 421 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 INTS9Q9NV88 658 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PCDHGB4Q9UN71 923 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SYNDIG1LA6NDD5 238 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 EIF4E1BA6NMX2 242 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TXNDC9O14530 226 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ANXA9O76027 345 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 LUC7L3O95232 432 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ATP5BP06576 529 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PYGLP06737 847 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CYP2A6P11509 494 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CCL5P13501 91 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CASP7P55210 303 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SESN2P58004 480 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 C6orf118Q5T5N4 469 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ACAD11Q709F0 780 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF438Q7Z4V0 828 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CCNYL1Q8N7R7 359 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SLC26A7Q8TE54 656 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TMEM117Q9H0C3 514 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CERS4Q9HA82 394 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 NSMCE4AQ9NXX6 385 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CD274Q9NZQ7 290 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SLIT3O75094 1523 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ACKR2O00590 384 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ACSL3O95573 720 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MAPTP10636 758 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 KCNA2P16389 499 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GUCY2CP25092 1073 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 HMOX2P30519 316 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MDM2Q00987 491 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CYP24A1Q07973 514 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 LRRC8DQ7L1W4 858 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GET4Q7L5D6 327 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PLPPR4Q7Z2D5 763 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ADSSL1Q8N142 457 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PPM1NQ8N819 430 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PDZD8Q8NEN9 1154 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PPTC7Q8NI37 304 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ARNTL2Q8WYA1 636 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 SPACA7Q96KW9 195 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MIR1-1HGQ9H1L0 117 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 DMAP1Q9NPF5 467 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 IL17RBQ9NRM6 502 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 SMPD4Q9NXE4 827 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 VPS9D1Q9Y2B5 631 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 LACTBL1A8MY62 500 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ENDOD1O94919 500 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MMP3P08254 477 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 SETSIPP0DME0 302 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 BRAFP15056 766 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ARSEP51690 589 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CRHR2Q13324 411 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 AARS2Q5JTZ9 985 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ANKS6Q68DC2 871 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 LINC00523Q86TU6 105 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CRLF3Q8IUI8 442 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 DDIASQ8IXT1 998 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ZBED8Q8IZ13 594 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CPA6Q8N4T0 437 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 DNAJC7Q99615 494 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 NLNQ9BYT8 704 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 A0A087WUV0 522 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CTIFO43310 598 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GFAPP14136 432 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PAX3P23760 479 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ARHGDIAP52565 204 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GNGT1P63211 74 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GLE1Q53GS7 698 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 RETSATQ6NUM9 610 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 OTOP2Q7RTS6 562 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 SLFN11Q7Z7L1 901 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 TMC2Q8TDI7 906 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PPP1R13LQ8WUF5 828 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 TFB1MQ8WVM0 346 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 C1orf54Q8WWF1 131 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MKL1Q969V6 931 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GAD1Q99259 594 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 OGFRQ9NZT2 677 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 HDAC6Q9UBN7 1215 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 GRID2IPA4D2P6 1211 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 FAM47E-STBD1D6RA91 191 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ACAT1P24752 427 aaKnown RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ADCY2Q08462 1091 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MAPK8IP2Q13387 824 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PSMD5Q16401 504 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 TTC31Q49AM3 519 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 ATAT1Q5SQI0 421 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 NAPEPLDQ6IQ20 393 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CBWD2Q8IUF1 395 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 FEZF2Q8TBJ5 459 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 WHAMMQ8TF30 809 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 MAGEB10Q96LZ2 347 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-203ENST00000409101 PNMA5Q96PV4 448 aa5.23□□□□□ -1.57
SCN3A-203ENST00000409101 CCDC3Q9BQI4 270 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms