RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TMEM206Q9H813 350 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SLC39A2Q9NP94 309 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 AGPAT3Q9NRZ7 376 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 HSPBP1Q9NZL4 362 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SERTAD1Q9UHV2 236 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 MTF2Q9Y483 593 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 SHISA7A6NL88 538 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 TRIM66O15016 1216 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 IVLP07476 585 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 GPR15P49685 360 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 EPHA5P54756 1037 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 POU5F1Q01860 360 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 ALCAMQ13740 583 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 DSG2Q14126 1118 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 OSTM1Q86WC4 334 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 CSGALNACT2Q8N6G5 542 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 CCDC26Q8TAB7 109 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 ATOH1Q92858 354 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 MIEF2Q96C03 454 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 ASB16Q96NS5 453 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 SEPT5Q99719 369 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 MKNK1Q9BUB5 465 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 ASAH2Q9NR71 780 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 DLGAP2Q9P1A6 1054 aa10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 CPSF2Q9P2I0 782 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-202ENST00000409020 SMTNL1A8MU46 457 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 KLRC4O43908 158 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 ECI2O75521 394 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 KRT19P08727 400 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 FAM163BP0C2L3 166 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 PFKFB1P16118 471 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 CYP2J2P51589 502 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 BFSP1Q12934 665 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 SV2CQ496J9 727 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 CYP4A22Q5TCH4 519 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 IQCEQ6IPM2 695 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 VITQ6UXI7 678 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 KRBA2Q6ZNG9 492 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 GAREM2Q75VX8 874 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 TRIM74Q86UV6 250 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 TRIM73Q86UV7 250 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 CCDC105Q8IYK2 499 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 ACRBPQ8NEB7 543 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 PAGE5Q96GU1 130 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 LRRC3BQ96PB8 259 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 RBSNQ9H1K0 784 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 HEBP1Q9NRV9 189 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 PSD3Q9NYI0 1048 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 SUN2Q9UH99 717 aa10.36□□□□□ -0.75
NIF3L1-202ENST00000409020 EIF3DO15371 548 aaKnown RBP eCLIP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 LDHAP00338 332 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SKILP12757 684 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ALDH1A3P47895 512 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 CASP4P49662 377 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 AMPD3Q01432 767 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 STK4Q13043 487 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SNRNP35Q16560 246 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 MGAT5BQ3V5L5 792 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SLC44A4Q53GD3 710 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 LEKR1Q6ZMV7 388 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 DNAJB7Q7Z6W7 309 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 NT5DC4Q86YG4 428 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ELMOD1Q8N336 334 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 DTWD2Q8NBA8 298 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 KIAA0895Q8NCT3 520 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ZSCAN18Q8TBC5 510 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 PLEKHO2Q8TD55 490 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SMARCD2Q92925 531 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ELMO3Q96BJ8 720 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 PRRX2Q99811 253 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 OXCT2Q9BYC2 517 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 LRRC27Q9C0I9 530 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 INTS13Q9NVM9 706 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ABI2Q9NYB9 513 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ITGA11Q9UKX5 1188 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 HPSEQ9Y251 543 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 SNX9Q9Y5X1 595 aa10.35□□□□□ -0.75
NIF3L1-202ENST00000409020 ZNF233A6NK53 670 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 DPYSL4O14531 572 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 MICAL2O94851 1124 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 TMEM191BP0C7N4 346 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 DLATP10515 647 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 IMPDH2P12268 514 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 RFX1P22670 979 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 NDUFA8P51970 172 aa10.34□□□□□ -0.75
NIF3L1-202ENST00000409020 EPHB3P54753 998 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms