RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PIP5K1BO14986 540 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 LAMTOR5O43504 91 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 NPPBP16860 134 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 PTDSS1P48651 473 aaKnown RBP5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 TAP2Q03519 686 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 LMOD3Q0VAK6 560 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 TRIM71Q2Q1W2 868 aaKnown RBP5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 WDR78Q5VTH9 848 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 TAPT1Q6NXT6 567 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 CFAP52Q8N1V2 620 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 TP53I13Q8NBR0 393 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 MIEF2Q96C03 454 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 PPM1MQ96MI6 270 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC46A1Q96NT5 459 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 OR14A2Q96R54 314 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 TRIB1Q96RU8 372 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 VKORC1Q9BQB6 163 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 PCDHAC1Q9H158 963 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 AS3MTQ9HBK9 375 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 PLA2G3Q9NZ20 509 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 RAD54BQ9Y620 910 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 A0A1B0GVC2 190 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PRRT4C9JH25 899 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 NPIPB6E9PJ23 425 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 H7C4K7 107 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CYP27B1O15528 508 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 EPB41L2O43491 1005 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CCNT2O60583 730 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PIAS2O75928 621 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 KRT1P04264 644 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 HLA-DOAP06340 250 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPATA31D3P0C874 917 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 FCER1AP12319 257 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 ITGALP20701 1170 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC6A2P23975 617 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CASP2P42575 452 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PXNP49023 591 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PAPOLAP51003 745 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CHN2P52757 468 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 ALDH18A1P54886 795 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 DDX10Q13206 875 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 EFR3AQ14156 821 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC4A8Q2Y0W8 1093 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 FBXO47Q5MNV8 452 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 NT5DC1Q5TFE4 455 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CACHD1Q5VU97 1274 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 LVRNQ6Q4G3 990 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CRTC1Q6UUV9 634 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 KIAA0408Q6ZU52 694 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPATA31D4Q6ZUB0 917 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PCGF5Q86SE9 256 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 TAX1BP1Q86VP1 789 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CCDC117Q8IWD4 279 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 RHOT2Q8IXI1 618 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 GSPT2Q8IYD1 628 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 D2HGDHQ8N465 521 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PSD4Q8NDX1 1056 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PPHLN1Q8NEY8 458 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPPL3Q8TCT6 385 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 RSC1A1Q92681 617 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 TMEM176AQ96HP8 235 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 PHACTR3Q96KR7 559 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 TTYH3Q9C0H2 523 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 UNC45AQ9H3U1 944 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 DKK4Q9UBT3 224 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 ATP11BQ9Y2G3 1177 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 MTO1Q9Y2Z2 717 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 CDY1Q9Y6F8 540 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC30A1Q9Y6M5 507 aa5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 BAZ1BQ9UIG0 1483 aaKnown RBP5.51□□□□□ -1.53
HMGB3P18-201ENST00000406327 A0A087WZ62 844 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 RRN3P2A6NIE6 340 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 GOLGA6L6A8MZA4 724 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 EIF3FO00303 357 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 ASNA1O43681 348 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 RRP9O43818 475 aaKnown RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 VPS4BO75351 444 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 RAD17O75943 681 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 MAN1A1P33908 653 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 GCLCP48506 637 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLFN5Q08AF3 891 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 NPY5RQ15761 445 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 NOMO2Q5JPE7 1267 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 INTS11Q5TA45 600 aaKnown RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 ATPAF1Q5TC12 328 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 FCRL6Q6DN72 434 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 SFRP4Q6FHJ7 346 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZDHHC24Q6UX98 284 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 POLNQ7Z5Q5 900 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 CCDC28AQ8IWP9 274 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms