RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 MAGED2Q9UNF1 606 aaPredicted RBP28.09■■■□□ 2.09
HDAC11-206ENST00000405025 HEPACAM2A8MVW5 462 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 IKBKBO14920 756 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 CDC25CP30307 473 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 PSMC2P35998 433 aaKnown RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 NLRP12P59046 1061 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 RPL10AP62906 217 aaKnown RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 CYP27A1Q02318 531 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 NHLH1Q02575 133 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 PPP3CAQ08209 521 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 MLF2Q15773 248 aaPredicted RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 EDRF1Q3B7T1 1238 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 SLC44A4Q53GD3 710 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 ZNF667Q5HYK9 610 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 SPOPLQ6IQ16 392 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 C4orf50Q6ZRC1 276 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 INTS8Q75QN2 995 aaKnown RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 ARID3BQ8IVW6 561 aaPredicted RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 MYCBPAPQ8TBZ2 947 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 FOXQ1Q9C009 403 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 MAGEC2Q9UBF1 373 aaPredicted RBP28.08■■■□□ 2.09
HDAC11-206ENST00000405025 GREB1Q4ZG55 1949 aa28.08■■■□□ 2.09
HDAC11-206ENST00000405025 SLC38A8A6NNN8 435 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 NOL4O94818 638 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 PRAMEF12O95522 483 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 HLA-DRAP01903 254 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 F11P03951 625 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 FAM163BP0C2L3 166 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 RFX1P22670 979 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 BDNFP23560 247 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 MAGEA11P43364 429 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 GCLMP48507 274 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 PMS1P54277 932 aaKnown RBP28.07■■■□□ 2.08
HDAC11-206ENST00000405025 PFKPQ01813 784 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 ARHGAP15Q53QZ3 475 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 COBLL1Q53SF7 1204 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 ISM2Q6H9L7 571 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 GCNAQ96QF7 691 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 TRMT61BQ9BVS5 477 aaKnown RBP28.07■■■□□ 2.08
HDAC11-206ENST00000405025 TASP1Q9H6P5 420 aa28.07■■■□□ 2.08
HDAC11-206ENST00000405025 TICRRQ7Z2Z1 1910 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 A8MXQ7 604 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 GALR2O43603 387 aaPredicted RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 KINO60870 393 aaKnown RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 TADA3O75528 432 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 CSH1P0DML2 217 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 CSH2P0DML3 217 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 KRT13P13646 458 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 PSMC3P17980 439 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 PTPN1P18031 435 aaKnown RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 PIK3CAP42336 1068 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 STARD6P59095 220 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 MAPRE1Q15691 268 aaKnown RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 PHLDB3Q6NSJ2 640 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 LRRC3BQ96PB8 259 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 PRRX2Q99811 253 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 SLC46A2Q9BY10 475 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 SMG9Q9H0W8 520 aaKnown RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 MMRN2Q9H8L6 949 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 BRD9Q9H8M2 597 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 CHMP5Q9NZZ3 219 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 HOOK1Q9UJC3 728 aaKnown RBP28.06■■■□□ 2.08
HDAC11-206ENST00000405025 MAN1B1Q9UKM7 699 aa28.06■■■□□ 2.08
HDAC11-206ENST00000405025 ASS1P00966 412 aaKnown RBP28.05■■■□□ 2.08
HDAC11-206ENST00000405025 GDI1P31150 447 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 PTPN5P54829 565 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 SGSM1Q2NKQ1 1148 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 ANKRD40Q6AI12 368 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 ELOA2Q8IYF1 753 aaPredicted RBP28.05■■■□□ 2.08
HDAC11-206ENST00000405025 ADSSL1Q8N142 457 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 TAS1R2Q8TE23 839 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 DEPDC1BQ8WUY9 529 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 HEBP1Q9NRV9 189 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 TMEM30AQ9NV96 361 aa28.05■■■□□ 2.08
HDAC11-206ENST00000405025 TRIM49BA6NDI0 452 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 LRRN2O75325 713 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 CACNA2D1P54289 1103 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 MFSD6LQ8IWD5 586 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 B3GALNT2Q8NCR0 500 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 DDX23Q9BUQ8 820 aaKnown RBP28.04■■■□□ 2.08
HDAC11-206ENST00000405025 B3GNT5Q9BYG0 378 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 ZNF518BQ9C0D4 1074 aa28.04■■■□□ 2.08
HDAC11-206ENST00000405025 APOBEC3GQ9HC16 384 aaKnown RBP28.04■■■□□ 2.08
HDAC11-206ENST00000405025 SHISA7A6NL88 538 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 CLDN5O00501 218 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 DCNP07585 359 aaKnown RBP28.03■■■□□ 2.08
HDAC11-206ENST00000405025 CD44P16070 742 aaKnown RBP28.03■■■□□ 2.08
HDAC11-206ENST00000405025 CD72P21854 359 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 ASPAP45381 313 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 NUBP1P53384 320 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 PRKCQQ04759 706 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 VSTM1Q6UX27 236 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 TPRG1Q6ZUI0 275 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 ZC3H3Q8IXZ2 948 aaKnown RBP28.03■■■□□ 2.08
HDAC11-206ENST00000405025 CCDC105Q8IYK2 499 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 DNASE1L2Q92874 299 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 TRMT2BQ96GJ1 504 aaKnown RBP28.03■■■□□ 2.08
HDAC11-206ENST00000405025 SHDQ96IW2 340 aa28.03■■■□□ 2.08
HDAC11-206ENST00000405025 MYRFLQ96LU7 910 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms