RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 PSMA2P25787 234 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 SLC25A11Q02978 314 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 SEPT7Q16181 437 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 TAZQ16635 292 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 CAPN12Q6ZSI9 719 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 ACTL9Q8TC94 416 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 CPT1BQ92523 772 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 UTP4Q969X6 686 aaKnown RBP11.28□□□□□ -0.6
CLIP4-204ENST00000404424 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 ACSS3Q9H6R3 686 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 WDR35Q9P2L0 1181 aa11.28□□□□□ -0.6
CLIP4-204ENST00000404424 DOCK1Q14185 1865 aa11.27□□□□□ -0.6
CLIP4-204ENST00000404424 OGTO15294 1046 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 MED7O43513 233 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 DIAPH2O60879 1101 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 KRT3P12035 628 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 KDELR1P24390 212 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 SEZ6Q53EL9 994 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 C3orf62Q6ZUJ4 267 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 OTOAQ7RTW8 1153 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 ANKMY2Q8IV38 441 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 JDP2Q8WYK2 163 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 VPS11Q9H270 941 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 SAR1AQ9NR31 198 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 CST8O60676 142 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 MSCO60682 206 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 LRCH4O75427 683 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 MAFO75444 373 aaPredicted RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 DPEP1P16444 411 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TARSP26639 723 aaKnown RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TNFSF9P41273 254 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 HMGCS2P54868 508 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TFDP1Q14186 410 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF394Q53GI3 561 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 FAM160B1Q5W0V3 765 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 PDIK1LQ8N165 341 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 PAFAH2Q99487 392 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TCHPQ9BT92 498 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 TUBB6Q9BUF5 446 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 HAO1Q9UJM8 370 aa11.27□□□□□ -0.61
CLIP4-204ENST00000404424 CPSF3Q9UKF6 684 aaKnown RBP11.27□□□□□ -0.61
CLIP4-204ENST00000404424 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 GOLGA8MH3BSY2 632 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 RFC1P35251 1148 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ACAP1Q15027 740 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF699Q32M78 642 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 NLRP9Q7RTR0 991 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 CCDC125Q86Z20 511 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 PALM2Q8IXS6 379 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 CHST13Q8NET6 341 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 MZB1Q8WU39 189 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ACSF2Q96CM8 615 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 SLC7A6OSQ96CW6 309 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 FAXDC2Q96IV6 333 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ACO2Q99798 780 aaKnown RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 LNPEPQ9UIQ6 1025 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 APOC4-APOC2K7ER74 178 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 GAS2O43903 313 aaKnown RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 APOC2P02655 101 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 T-ENOLP0DO92 83 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 PTPN4P29074 926 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 SSTR1P30872 391 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 RPL22P35268 128 aaKnown RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 STAT5BP51692 787 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 GDF10P55107 478 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 WASHC2DQ5SRD0 308 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 IER5Q5VY09 327 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ANKRD22Q5VYY1 191 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 SCARA3Q6AZY7 606 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 EXOC8Q8IYI6 725 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 BANPQ8N9N5 519 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 FBXO36Q8NEA4 188 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 MRRFQ96E11 262 aaKnown RBP11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ZWILCHQ9H900 591 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 RNPEPL1Q9HAU8 725 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 ZFP69BQ9UJL9 534 aa11.26□□□□□ -0.61
CLIP4-204ENST00000404424 IQANK1A0A1B0GTG1 560 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 EGFRP00533 1210 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 TNNC2P02585 160 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms