RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MRPL45Q9BRJ2 306 aaKnown RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 SLC46A2Q9BY10 475 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 OSBPL6Q9BZF3 934 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 GZF1Q9H116 711 aaPredicted RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 TRPV5Q9NQA5 729 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 FRMD4BQ9Y2L6 1034 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 F5P12259 2224 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 GOLGA6L4A6NEF3 574 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 SLC38A8A6NNN8 435 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 LRRIQ3A6PVS8 624 aaPredicted RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 MAN2B1O00754 1011 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 CHADO15335 359 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 NCAM2O15394 837 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 FAM163BP0C2L3 166 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 TARSP26639 723 aaKnown RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 CYP27A1Q02318 531 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 CFAP221Q4G0U5 840 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 TMEM150AQ86TG1 271 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 MAB21L3Q8N8X9 362 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 CSGALNACT1Q8TDX6 532 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 TMEM174Q8WUU8 243 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 LRRC3BQ96PB8 259 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 SPATA6Q9NWH7 488 aaPredicted RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 OBP2AQ9NY56 170 aa14.23□□□□□ -0.13
SDF4-203ENST00000403997 UXTQ9UBK9 157 aaPredicted RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
SDF4-203ENST00000403997 GFRA3O60609 400 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 TACC1O75410 805 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 PRAMEF12O95522 483 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
SDF4-203ENST00000403997 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
SDF4-203ENST00000403997 BDNFP23560 247 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
SDF4-203ENST00000403997 WEE1P30291 646 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 AVPR1AP37288 418 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 GRIK1P39086 918 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 NBL1P41271 181 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 MAGEA11P43364 429 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 KPNA1P52294 538 aaPredicted RBP14.22□□□□□ -0.13
SDF4-203ENST00000403997 DLG4P78352 724 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 CLDN10P78369 228 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 FCHO2Q0JRZ9 810 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 NCOA4Q13772 614 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 KCNB1Q14721 858 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 TDRD10Q5VZ19 366 aaKnown RBP14.22□□□□□ -0.13
SDF4-203ENST00000403997 FRMD5Q7Z6J6 570 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 CMTM8Q8IZV2 173 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 BPIFB1Q8TDL5 484 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 FAM3CQ92520 227 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 MYLPFQ96A32 169 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 SMG9Q9H0W8 520 aaKnown RBP14.22□□□□□ -0.13
SDF4-203ENST00000403997 XYLT2Q9H1B5 865 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 ZMYM5Q9UJ78 669 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 TRAF3IP3Q9Y228 551 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 PIAS3Q9Y6X2 628 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 COL4A3Q01955 1670 aa14.22□□□□□ -0.13
SDF4-203ENST00000403997 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 SHISA7A6NL88 538 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 A8MXQ7 604 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 PROB1E7EW31 1015 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 NOL4O94818 638 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 PTPN1P18031 435 aaKnown RBP14.21□□□□□ -0.13
SDF4-203ENST00000403997 MAGEA9P43362 315 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 FOXK2Q01167 660 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 ZNF699Q32M78 642 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 ARHGAP29Q52LW3 1261 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 ZNF667Q5HYK9 610 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 MDH1BQ5I0G3 518 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 TXNDC8Q6A555 127 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 VSTM1Q6UX27 236 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 MON1AQ86VX9 555 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 CELF5Q8N6W0 485 aaKnown RBP14.21□□□□□ -0.13
SDF4-203ENST00000403997 MYCBPAPQ8TBZ2 947 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 CLDN23Q96B33 292 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 TRMT2BQ96GJ1 504 aaKnown RBP14.21□□□□□ -0.13
SDF4-203ENST00000403997 PCED1BQ96HM7 432 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 ZFYVE19Q96K21 471 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 MYRFLQ96LU7 910 aa14.21□□□□□ -0.13
SDF4-203ENST00000403997 THG1LQ9NWX6 298 aaKnown RBP14.21□□□□□ -0.13
SDF4-203ENST00000403997 ARNTLO00327 626 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 LAMTOR5O43504 91 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 VNN1O95497 513 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 SP9P0CG40 484 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 NR2F2P24468 414 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 CCNE1P24864 410 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 RPL13P26373 211 aaKnown RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 ANXA13P27216 316 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 VAMP7P51809 220 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 CDH8P55286 799 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 FMR1NBQ8N0W7 255 aaPredicted RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 GUF1Q8N442 669 aaKnown RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 TTC8Q8TAM2 541 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 NKD2Q969F2 451 aaPredicted RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 SPATA17Q96L03 361 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms