RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 DDIT4Q9NX09 232 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 TAF6LQ9Y6J9 622 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 EVPLLA8MZ36 301 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 SLC37A4O43826 429 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 KLC1Q07866 573 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 TRIM65Q6PJ69 517 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 MOXD1Q6UVY6 613 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 GFM2Q969S9 779 aaKnown RBP19.25■□□□□ 0.67
USP25-204ENST00000400183 RUSC1Q9BVN2 902 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 CRLS1Q9UJA2 301 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 SOAT2O75908 522 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 ODC1P11926 461 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 RBBP8Q99708 897 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 BRD8Q9H0E9 1235 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 CHORDC1Q9UHD1 332 aaPredicted RBP19.25■□□□□ 0.67
USP25-204ENST00000400183 DOLKQ9UPQ8 538 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
USP25-204ENST00000400183 SLC30A9Q6PML9 568 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 HS6ST3Q8IZP7 471 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 PRG3Q9Y2Y8 225 aaPredicted RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 REREQ9P2R6 1566 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 POU4F1Q01851 419 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 GRB10Q13322 594 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 TDRD10Q5VZ19 366 aaKnown RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 CD302Q8IX05 232 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CYGBQ8WWM9 190 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 KIAA1257Q9ULG3 409 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 TRPC5OSA6NMA1 111 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 M0QYT0 321 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 DAB1O75553 588 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 ITPK1Q13572 414 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 PRPF39Q86UA1 669 aaKnown RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 WNK4Q96J92 1243 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 GLT1D1Q96MS3 346 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CINPQ9BW66 212 aaPredicted RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 L2HGDHQ9H9P8 463 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CCND1P24385 295 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 PTPN7P35236 360 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 MAPK7Q13164 816 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 ADCK1Q86TW2 530 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 CDR2LQ86X02 465 aaPredicted RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 INPP5DQ92835 1189 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 WDCPQ9H6R7 721 aa19.24■□□□□ 0.67
USP25-204ENST00000400183 ABI2Q9NYB9 513 aaPredicted RBP19.24■□□□□ 0.67
USP25-204ENST00000400183 LOC100653049A0A140TA62 436 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 KRT34O76011 436 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 TTLL9Q3SXZ7 439 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 ZFYVE19Q96K21 471 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 LBHD1Q9BQE6 289 aaPredicted RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 CCT8L1PA6NM43 557 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 PMPCBO75439 489 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 TCN1P20061 433 aaPredicted RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 SEC24CP53992 1094 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 GEMP55040 296 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 LRRC6Q86X45 466 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 PLD3Q8IV08 490 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 HNRNPLLQ8WVV9 542 aaKnown RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 SLC40A1Q9NP59 571 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 KRT87PA6NCN2 255 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 CCDC15Q0P6D6 951 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 SGO1Q5FBB7 561 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 BBS7Q8IWZ6 715 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 TNIP2Q8NFZ5 429 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 NSL1Q96IY1 281 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 C17orf80Q9BSJ5 609 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 FOXN3O00409 490 aaPredicted RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 KDM1AO60341 852 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 CAND2O75155 1236 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 PON1P27169 355 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 HUNKP57058 714 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 CENPPQ6IPU0 288 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 SAMD7Q7Z3H4 446 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 CCNJLQ8IV13 435 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 YIPF2Q9BWQ6 316 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 DDX28Q9NUL7 540 aaKnown RBP19.23■□□□□ 0.67
USP25-204ENST00000400183 GIMAP4Q9NUV9 329 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
USP25-204ENST00000400183 C17orf102A2RUQ5 167 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 H2AFXP16104 143 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 TGM2P21980 687 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 SLC11A2P49281 568 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 UGT3A1Q6NUS8 523 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 COL23A1Q86Y22 540 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 ARID3BQ8IVW6 561 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 USP13Q92995 863 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 A0A087X0T9 212 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 WDR47O94967 919 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 FAM228BP0C875 321 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 ATXN3P54252 364 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 H2AFY2Q9P0M6 372 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 PCDHB7Q9Y5E2 793 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 ACO1P21399 889 aaKnown RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 S100A5P33763 92 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 HPCAP84074 193 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms