RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
VCX3A-202ENST00000398729 YAF2Q8IY57 180 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 CCDC47Q96A33 483 aaKnown RBP14.37□□□□□ -0.11
VCX3A-202ENST00000398729 CLDN23Q96B33 292 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 MMS19Q96T76 1030 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 MKNK1Q9BUB5 465 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 BCO2Q9BYV7 579 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 TASP1Q9H6P5 420 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 IL21Q9HBE4 155 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 ZMYM5Q9UJ78 669 aa14.37□□□□□ -0.11
VCX3A-202ENST00000398729 MRPS17Q9Y2R5 130 aaKnown RBP14.37□□□□□ -0.11
VCX3A-202ENST00000398729 FAM237AA0A1B0GTK4 181 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 A0A1W2PQ27 194 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 A0A1W2PQ64 194 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 A0A1W2PQD8 194 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 DPYSL4O14531 572 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 CSH1P0DML2 217 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 CSH2P0DML3 217 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 MAGEA9P43362 315 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 NDUFA8P51970 172 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 TRPC3Q13507 836 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 LIMS2Q7Z4I7 341 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 FSIP1Q8NA03 581 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 FUBP3Q96I24 572 aaKnown RBP eCLIP14.36□□□□□ -0.11
VCX3A-202ENST00000398729 PKMYT1Q99640 499 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 CDH9Q9ULB4 789 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 PCDHGA2Q9Y5H1 932 aa14.36□□□□□ -0.11
VCX3A-202ENST00000398729 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 PHACTR2O75167 634 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 KIF20AO95235 890 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 RPN1P04843 607 aaKnown RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 CYP2F1P24903 491 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 TARSP26639 723 aaKnown RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 WEE1P30291 646 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 GPR15P49685 360 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 TNNC1P63316 161 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 CYP4F8P98187 520 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 FCHO2Q0JRZ9 810 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 MAPRE1Q15691 268 aaKnown RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 CFAP221Q4G0U5 840 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 FAM171BQ6P995 826 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 TSSK4Q6SA08 328 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 C4orf50Q6ZRC1 276 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 GPIHBP1Q8IV16 184 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 ZNF687Q8N1G0 1237 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 CSGALNACT1Q8TDX6 532 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 ATRIPQ8WXE1 791 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 EPC1Q9H2F5 836 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 ZSCAN32Q9NX65 697 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 OBP2AQ9NY56 170 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 NCDNQ9UBB6 729 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 MAGED2Q9UNF1 606 aaPredicted RBP14.35□□□□□ -0.11
VCX3A-202ENST00000398729 NCANO14594 1321 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 TICRRQ7Z2Z1 1910 aa14.35□□□□□ -0.11
VCX3A-202ENST00000398729 MYBPHLA2RUH7 354 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 DCDC2BA2VCK2 349 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 PDXKO00764 312 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 CHADO15335 359 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 HCRTO43612 131 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 FAM163BP0C2L3 166 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 HMGA1P17096 107 aaKnown RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 LMO2P25791 158 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 DDX6P26196 483 aaKnown RBP eCLIP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 AP3M2P53677 418 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 NLRP12P59046 1061 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 PSMC1P62191 440 aaKnown RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 DDR2Q16832 855 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 WDR72Q3MJ13 1102 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 SDHAF4Q5VUM1 108 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 KRBA2Q6ZNG9 492 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 SCN4BQ8IWT1 228 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 GPR161Q8N6U8 529 aaKnown RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 TMEM174Q8WUU8 243 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 ZNF516Q92618 1163 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 SYAP1Q96A49 352 aaPredicted RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 CCDC34Q96HJ3 373 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 PARD6AQ9NPB6 346 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 DMAC2Q9NW81 257 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 UXTQ9UBK9 157 aaPredicted RBP14.34□□□□□ -0.11
VCX3A-202ENST00000398729 PIAS3Q9Y6X2 628 aa14.34□□□□□ -0.11
VCX3A-202ENST00000398729 CEP295Q9C0D2 2601 aa14.33□□□□□ -0.11
VCX3A-202ENST00000398729 DENND4CQ5VZ89 1909 aa14.33□□□□□ -0.11
VCX3A-202ENST00000398729 COL4A2P08572 1712 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 SLC38A8A6NNN8 435 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 SOBPA7XYQ1 873 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 ARNTLO00327 626 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 CALUO43852 315 aaPredicted RBP14.33□□□□□ -0.12
VCX3A-202ENST00000398729 ATP2C2O75185 946 aa14.33□□□□□ -0.12
VCX3A-202ENST00000398729 TACC1O75410 805 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms