RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 SNX25Q9H3E2 840 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 ROPN1Q9HAT0 212 aaPredicted RBP7.78□□□□□ -1.16
RGPD1-201ENST00000398193 SAGE1Q9NXZ1 904 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 HESX1Q9UBX0 185 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 AMACRQ9UHK6 382 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 ZNF135P52742 658 aaPredicted RBP7.78□□□□□ -1.16
RGPD1-201ENST00000398193 MAP3K21Q5TCX8 1036 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 SCARA5Q6ZMJ2 495 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 PASD1Q8IV76 773 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 ANKRD52Q8NB46 1076 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 IFT81Q8WYA0 676 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 OSBPL8Q9BZF1 889 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 FAM49AQ9H0Q0 323 aaPredicted RBP7.78□□□□□ -1.16
RGPD1-201ENST00000398193 hCG_1818297A0A087WSY0 165 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 SMIM28A0A1B0GU29 152 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 H3BQF6 201 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 AGPSO00116 658 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 FBXO21O94952 628 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 TGM2P21980 687 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 GGCXP38435 758 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 PSMC4P43686 418 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 DSC3Q14574 896 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 PIK3R5Q8WYR1 880 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 TRIM62Q9BVG3 475 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 SYNCQ9H7C4 482 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 TMBIM4Q9HC24 238 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 ERVK-5Q9HDB9 667 aa7.78□□□□□ -1.16
RGPD1-201ENST00000398193 TSC2P49815 1807 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.77□□□□□ -1.16
RGPD1-201ENST00000398193 RNF40O75150 1001 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 ENDOD1O94919 500 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 TRUB2O95900 331 aaKnown RBP7.77□□□□□ -1.16
RGPD1-201ENST00000398193 CD19P15391 556 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 MARCKSL1P49006 195 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 DNA2P51530 1060 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 SLC6A3Q01959 620 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 DMTNQ08495 405 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 CCDC105Q8IYK2 499 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 FAM76AQ8TAV0 307 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 TRIB2Q92519 343 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 HNRNPABQ99729 332 aaKnown RBP7.77□□□□□ -1.16
RGPD1-201ENST00000398193 RSAD1Q9HA92 442 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 GRHL1Q9NZI5 618 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 RCOR3Q9P2K3 495 aaPredicted RBP7.77□□□□□ -1.16
RGPD1-201ENST00000398193 CDY2AQ9Y6F7 541 aa7.77□□□□□ -1.16
RGPD1-201ENST00000398193 KPNA7A9QM74 516 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 XPO1O14980 1071 aaKnown RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 EIF3HO15372 352 aaKnown RBP eCLIP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 TCEA3O75764 348 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CFHP08603 1231 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ZNF252P-AS1Q0IIN9 211 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CALCOCO2Q13137 446 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 HIC1Q14526 733 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 SLC43A3Q8NBI5 491 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 SLC35F5Q8WV83 523 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 RRN3Q9NYV6 651 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 C3orf70A6NLC5 250 aaPredicted RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 LIASO43766 372 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ABHD2P08910 425 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ZFXP17010 805 aaPredicted RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CTGFP29279 349 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 TAS2R40P59535 323 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 NBPF20Q3BBV1 942 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 KDM7AQ6ZMT4 941 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 DDX20Q9UHI6 824 aaKnown RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 TSPAN16Q9UKR8 245 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 RAD54BQ9Y620 910 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 PTCH2Q9Y6C5 1203 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 C2CD4BA6NLJ0 364 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 MDM4O15151 490 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 HUS1O60921 280 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CYP11A1P05108 521 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 PFKMP08237 780 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CAPN2P17655 700 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ARSEP51690 589 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 SLC8A3P57103 927 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 HLTFQ14527 1009 aaKnown RBP eCLIP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 PPP1R7Q15435 360 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 TTC27Q6P3X3 843 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ZDHHC24Q6UX98 284 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 RNF180Q86T96 592 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 MAP7D3Q8IWC1 876 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ARFGAP2Q8N6H7 521 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ALLCQ8N6M5 410 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CENPIQ92674 756 aaPredicted RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 XPNPEP3Q9NQH7 507 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ABT1Q9ULW3 272 aaKnown RBP7.77□□□□□ -1.17
RGPD1-201ENST00000398193 CFAP69A5D8W1 941 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 H0YGN5 161 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 GABRDO14764 452 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 RNF8O76064 485 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 RARGP13631 454 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 ATF2P15336 505 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 KLRC2P26717 231 aa7.77□□□□□ -1.17
RGPD1-201ENST00000398193 GNL1P36915 607 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms