RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 DENND1BQ6P3S1 775 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 ANKS3Q6ZW76 656 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 TMEM110Q86TL2 294 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 WDTC1Q8N5D0 677 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 C12orf29Q8N999 325 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 LRRC57Q8N9N7 239 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC35F5Q8WV83 523 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 ATRIPQ8WXE1 791 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 ZNF592Q92610 1267 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 FUBP3Q96I24 572 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 WDR24Q96S15 920 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 NCAPGQ9BPX3 1015 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 LBHD1Q9BQE6 289 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 C11orf70Q9BRQ4 267 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 NUP85Q9BW27 656 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC4A5Q9BY07 1137 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 IRX2Q9BZI1 471 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PRG3Q9Y2Y8 225 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 CAPN6Q9Y6Q1 641 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 TSC2P49815 1807 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 MIF4GDA9UHW6 222 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 MYO1FO00160 1098 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 CES2O00748 559 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 BUB1O43683 1085 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 PALMO75781 387 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 UPP2O95045 317 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 ABL1P00519 1130 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 FAM200BP0CF97 657 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 NPR3P17342 541 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 DESP17661 470 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 TCP1P17987 556 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 MAN1A1P33908 653 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 MRPL58Q14197 206 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 DNAJC24Q6P3W2 148 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 FUT10Q6P4F1 479 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 MMS22LQ6ZRQ5 1243 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 ARCQ7LC44 396 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 DAAM2Q86T65 1068 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 FNIP1Q8TF40 1166 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 C2orf15Q8WU43 125 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 KCTD13Q8WZ19 329 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 HERVK_113Q902F9 699 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 BADQ92934 168 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 SMARCD1Q96GM5 515 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 ZNF558Q96NG5 402 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 RNF14Q9UBS8 474 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 SALL4Q9UJQ4 1053 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 INSL6Q9Y581 213 aa20.1■□□□□ 0.81
TSPAN4-204ENST00000397404 SART1O43290 800 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 RRM1P23921 792 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 HTRA4P83105 476 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 MAMLD1Q13495 774 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 BTG3Q14201 252 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 ACAP1Q15027 740 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 CLUL1Q15846 466 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 C7orf61Q8IZ16 206 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC2A14Q8TDB8 520 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 ARHGEF26Q96DR7 871 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 YME1L1Q96TA2 773 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 DPEP3Q9H4B8 488 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 CWH43Q9H720 699 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 FAM49BQ9NUQ9 324 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 MARCH5Q9NX47 278 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 AMFRQ9UKV5 643 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 TFR2Q9UP52 801 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 NME7Q9Y5B8 376 aa20.09■□□□□ 0.81
TSPAN4-204ENST00000397404 GRID2IPA4D2P6 1211 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 SIGLEC16A6NMB1 481 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 B4GALT3O60512 393 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 GJB5O95377 273 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 CFHP08603 1231 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 TUBB4BP68371 445 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 ORC1Q13415 861 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 PTPN20Q4JDL3 420 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 PEX26Q7Z412 305 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 TTC30AQ86WT1 665 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 FUKQ8N0W3 1084 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 FEZF2Q8TBJ5 459 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 IGSF21Q96ID5 467 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 CEP295NLQ96MC4 621 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 TTPALQ9BTX7 342 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 ABCB6Q9NP58 842 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 TMEM51Q9NW97 253 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 IP6K2Q9UHH9 426 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 RWDD3Q9Y3V2 267 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 SAR1BQ9Y6B6 198 aa20.08■□□□□ 0.81
TSPAN4-204ENST00000397404 ALPK3Q96L96 1907 aa20.08■□□□□ 0.8
TSPAN4-204ENST00000397404 FBXO21O94952 628 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 EFEMP2O95967 443 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 CALCAP01258 141 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 ITGB1P05556 798 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 CREMQ03060 361 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 CFAP221Q4G0U5 840 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 PAN2Q504Q3 1202 aaKnown RBP20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 MDH1BQ5I0G3 518 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 TMEM240Q5SV17 173 aa20.07■□□□□ 0.8
TSPAN4-204ENST00000397404 MEI1Q5TIA1 1274 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms