RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 VPS52Q8N1B4 723 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 ACRBPQ8NEB7 543 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 C2orf15Q8WU43 125 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 PCED1BQ96HM7 432 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 FUBP3Q96I24 572 aaKnown RBP eCLIP24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 PCDHB18PQ96TA0 734 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 PKMYT1Q99640 499 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 DESI2Q9BSY9 194 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 TSGA10Q9BZW7 698 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 ISCUQ9H1K1 167 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 PPP2R2CQ9Y2T4 447 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 PCDHA13Q9Y5I0 950 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 VWA8A3KMH1 1905 aa24.96■■□□□ 1.59
TSPAN4-202ENST00000397396 MYBPHLA2RUH7 354 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 TBC1D4O60343 1298 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 ATP2C2O75185 946 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 CA3P07451 260 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 H2AFZP0C0S5 128 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 FAM200BP0CF97 657 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 MYBL1P10243 752 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 CCDC130P13994 396 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 CPB1P15086 417 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 VAV2P52735 878 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 CYP27A1Q02318 531 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 KIAA0319Q5VV43 1072 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 NAA35Q5VZE5 725 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 SLC8B1Q6J4K2 584 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 H2AFVQ71UI9 128 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 TAS1R1Q7RTX1 841 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 SPATA2LQ8IUW3 424 aaPredicted RBP24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 PASD1Q8IV76 773 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 FUKQ8N0W3 1084 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 MYLPFQ96A32 169 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 SMARCD1Q96GM5 515 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 VCPIP1Q96JH7 1222 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 ZBP1Q9H171 429 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 KCND1Q9NSA2 647 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 GTF3C4Q9UKN8 822 aa24.95■■□□□ 1.58
TSPAN4-202ENST00000397396 GRXCR1A8MXD5 290 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 CTSAP10619 480 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 MSNP26038 577 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 ADORA2BP29275 332 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 FAM109BQ6ICB4 259 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 DENND1BQ6P3S1 775 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 FAM35AQ86V20 835 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 KIAA1524Q8TCG1 905 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 IPO4Q8TEX9 1081 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 STK32AQ8WU08 396 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 B3GALT6Q96L58 329 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 ABCB6Q9NP58 842 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 CYLDQ9NQC7 956 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 FNIP2Q9P278 1114 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 TNRC18O15417 2968 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 NLRC5Q86WI3 1866 aa24.94■■□□□ 1.58
TSPAN4-202ENST00000397396 ANKRD62A6NC57 917 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 ZNF263O14978 683 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 CALB1P05937 261 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 NPR3P17342 541 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 ERVK-21P61565 698 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 C1QBPQ07021 282 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 GPR17Q13304 367 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 CFAP221Q4G0U5 840 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 SLC39A12Q504Y0 691 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 PKDCCQ504Y2 493 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 ZNF662Q6ZS27 426 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 PALB2Q86YC2 1186 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 PHF13Q86YI8 300 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 C1orf131Q8NDD1 294 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 FBXO22Q8NEZ5 403 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 SPPL2BQ8TCT7 592 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 CTNNBL1Q8WYA6 563 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 DUSP16Q9BY84 665 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 B3GNT5Q9BYG0 378 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 STRIP2Q9ULQ0 834 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 PCDHB5Q9Y5E4 795 aa24.93■■□□□ 1.58
TSPAN4-202ENST00000397396 FTLP02792 175 aaPredicted RBP24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 TMEM253P0C7T8 217 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 GPD2P43304 727 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 KIF5AQ12840 1032 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 LIN9Q5TKA1 542 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 TTC30AQ86WT1 665 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 SECISBP2LQ93073 1101 aaKnown RBP24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 C17orf80Q9BSJ5 609 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 PBX4Q9BYU1 374 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 KRT82Q9NSB4 513 aa24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 REXO2Q9Y3B8 237 aaKnown RBP24.92■■□□□ 1.58
TSPAN4-202ENST00000397396 TMCO5BA8MYB1 307 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 XPO1O14980 1071 aaKnown RBP24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 KRT86O43790 486 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 LPXNO60711 386 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 AP1G2O75843 785 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 CFHP08603 1231 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 MYOGP15173 224 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 ACADSBP45954 432 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 PDE12Q6L8Q7 609 aaKnown RBP24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 PRSS55Q6UWB4 352 aaPredicted RBP24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 VSTM1Q6UX27 236 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 ERICH1Q86X53 443 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 CPA5Q8WXQ8 436 aa24.91■■□□□ 1.58
TSPAN4-202ENST00000397396 HSFY1Q96LI6 401 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms