RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CAMKK1Q8N5S9 505 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 GAB3Q8WWW8 586 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 CALML4Q96GE6 196 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 CHAMP1Q96JM3 812 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 GCNAQ96QF7 691 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 FAM83CQ9BQN1 747 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 CCSER1Q9C0I3 900 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 PARVGQ9HBI0 331 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 C2orf42Q9NWW7 574 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 C2CD2Q9Y426 696 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 CITO14578 2027 aa9.46□□□□□ -0.9
CAPN3-208ENST00000397204 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 CYB561D2O14569 222 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 TRDMT1O14717 391 aaKnown RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 AXIN1O15169 862 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 EXTL3O43909 919 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 RPP40O75818 363 aaKnown RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 FAM13AO94988 1023 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 PRAMEF12O95522 483 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 HAPLN1P10915 354 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 ATF6P18850 670 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 DRD1P21728 446 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 AVPR1AP37288 418 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 TAF6P49848 677 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 RUNX3Q13761 415 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 MGAT5BQ3V5L5 792 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 PKDCCQ504Y2 493 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 TMEM196Q5HYL7 178 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 GPBP1Q86WP2 473 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 DCP1BQ8IZD4 617 aaKnown RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 CYP4X1Q8N118 509 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 TTC9BQ8N6N2 239 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 OR10T2Q8NGX3 314 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 EXOC4Q96A65 974 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 ZC3H10Q96K80 434 aaKnown RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 SEPT5Q99719 369 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-208ENST00000397204 LPIN3Q9BQK8 851 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 REEP2Q9BRK0 252 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 ARRDC1-AS1Q9H2J1 176 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 TDP1Q9NUW8 608 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 DPP3Q9NY33 737 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 MAP10Q9P2G4 905 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 SLC8A2Q9UPR5 921 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 PCDHB5Q9Y5E4 795 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 PCDHGA5Q9Y5G8 931 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 STYXL1Q9Y6J8 313 aa9.45□□□□□ -0.9
CAPN3-208ENST00000397204 ANKRD63C9JTQ0 380 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 K7ENM7 598 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 EPN2O95208 641 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 F11P03951 625 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 KRT18P05783 430 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 HMGA1P17096 107 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ACOT2P49753 483 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 WNT7BP56706 349 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 NLRP12P59046 1061 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 CYP4F8P98187 520 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 DHX8Q14562 1220 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ZNF268Q14587 947 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 POSTNQ15063 836 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 NFE2Q16621 373 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ST3GAL2Q16842 350 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 FBXO43Q4G163 708 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 AASDHQ4L235 1098 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ADALQ6DHV7 355 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 CC2D1AQ6P1N0 951 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 SLC39A4Q6P5W5 647 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 LRRTM3Q86VH5 581 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 MON1AQ86VX9 555 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 MAB21L3Q8N8X9 362 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 C12orf50Q8NA57 414 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 MRPS31Q92665 395 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 KIF2CQ99661 725 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 PYM1Q9BRP8 204 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ST6GALNAC4Q9H4F1 302 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 KIF9Q9HAQ2 790 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ANGPTL2Q9UKU9 493 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
CAPN3-208ENST00000397204 ZFHX4Q86UP3 3567 aa9.44□□□□□ -0.9
CAPN3-208ENST00000397204 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 KPNA7A9QM74 516 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 H3BQV1 296 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 IL18RAPO95256 599 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 BMP15O95972 392 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 NFICP08651 508 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 CSH1P0DML2 217 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 CSH2P0DML3 217 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 CCDC192P0DO97 292 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 DDIT3P35638 169 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 LONP1P36776 959 aaKnown RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 PNPLA4P41247 253 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 GALK1P51570 392 aa9.43□□□□□ -0.9
CAPN3-208ENST00000397204 RPL10AP62906 217 aaKnown RBP9.43□□□□□ -0.9
CAPN3-208ENST00000397204 SHC2P98077 582 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms