RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPATA20Q8TB22 786 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 ZNF516Q92618 1163 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 SMARCE1Q969G3 411 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 FAXDC2Q96IV6 333 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 TNIP3Q96KP6 325 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 SPATA17Q96L03 361 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 MYRFLQ96LU7 910 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 DDX23Q9BUQ8 820 aaKnown RBP14.9□□□□□ -0.02
SEC13-204ENST00000397099 IMPG2Q9BZV3 1241 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 FOXQ1Q9C009 403 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 XYLT2Q9H1B5 865 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 TASP1Q9H6P5 420 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 BRD9Q9H8M2 597 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 MIA3Q5JRA6 1907 aa14.9□□□□□ -0.02
SEC13-204ENST00000397099 USP34Q70CQ2 3546 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 MAN2B1O00754 1011 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 DPYSL4O14531 572 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 ZNF263O14978 683 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 TRIM66O15016 1216 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 KINO60870 393 aaKnown RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 C4BPAP04003 597 aaKnown RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 PFKLP17858 780 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 GTF2H1P32780 548 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 VAMP7P51809 220 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 MCCD1P59942 119 aaPredicted RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 MYL6P60660 151 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 ADAM9Q13443 819 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 STIM1Q13586 685 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 TDRD10Q5VZ19 366 aaKnown RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 OSTM1Q86WC4 334 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 YAF2Q8IY57 180 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 FAM186BQ8IYM0 893 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 CCDC150Q8NCX0 1101 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 OR6B3Q8NGW1 331 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 MRPS31Q92665 395 aaKnown RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 TSG101Q99816 390 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 LPIN3Q9BQK8 851 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 ELOVL4Q9GZR5 314 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 GZF1Q9H116 711 aaPredicted RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 FAM124BQ9H5Z6 455 aaPredicted RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 TMLHEQ9NVH6 421 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 PTPRDP23468 1912 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 ZNF638Q14966 1978 aaKnown RBP14.89□□□□□ -0.03
SEC13-204ENST00000397099 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
SEC13-204ENST00000397099 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 MYBPHLA2RUH7 354 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 CETN3O15182 167 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 CHADO15335 359 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 SOAT2O75908 522 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 NOL4O94818 638 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ACAT1P24752 427 aaKnown RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 CYP2F1P24903 491 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ANXA13P27216 316 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 NBL1P41271 181 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 PPP3CCP48454 512 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 FCHO2Q0JRZ9 810 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 PNOCQ13519 176 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ZCWPW2Q504Y3 356 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ARHGAP29Q52LW3 1261 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ZNF852Q6ZMS4 543 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 TTC39CQ8N584 583 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 CELF5Q8N6W0 485 aaKnown RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 PJA1Q8NG27 643 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 GIPC2Q8TF65 315 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 NKD2Q969F2 451 aaPredicted RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 ZSWIM3Q96MP5 696 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 IL21Q9HBE4 155 aa14.88□□□□□ -0.03
SEC13-204ENST00000397099 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 THG1LQ9NWX6 298 aaKnown RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 NXF1Q9UBU9 619 aaKnown RBP14.88□□□□□ -0.03
SEC13-204ENST00000397099 HEPACAM2A8MVW5 462 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 A8MXQ7 604 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 CLSTN1O94985 981 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 F11P03951 625 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 EPB41P11171 864 aaKnown RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 HMGA1P17096 107 aaKnown RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 PTPN1P18031 435 aaKnown RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 LMO2P25791 158 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 GDI1P31150 447 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 AVPR1AP37288 418 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 CASP4P49662 377 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 NLRP12P59046 1061 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 FKBP3Q00688 224 aaKnown RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 ZNF268Q14587 947 aaPredicted RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 UBXN2BQ14CS0 331 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 FOXR2Q6PJQ5 311 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 VITQ6UXI7 678 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 SV2AQ7L0J3 742 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 UNC93AQ86WB7 457 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 ARID3BQ8IVW6 561 aaPredicted RBP14.87□□□□□ -0.03
SEC13-204ENST00000397099 FAM84AQ96KN4 292 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 IER2Q9BTL4 223 aa14.87□□□□□ -0.03
SEC13-204ENST00000397099 MAPK8IP1Q9UQF2 711 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms