RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 RFFLQ8WZ73 363 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 PADI4Q9UM07 663 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 ARHGAP31Q2M1Z3 1444 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 YWHAQP27348 245 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 NT5C2P49902 561 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 MRPL28Q13084 256 aaKnown RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 PRKAA1Q13131 559 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 TRIM69Q86WT6 500 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 RERGLQ9H628 205 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 HMX1Q9NP08 348 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 WDR35Q9P2L0 1181 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 SNX8Q9Y5X2 465 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 CPSF4O95639 269 aaKnown RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 CCDC60Q8IWA6 550 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 TFB1MQ8WVM0 346 aaKnown RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 OTOAQ7RTW8 1153 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 PRPF18Q99633 342 aaKnown RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 LNPEPQ9UIQ6 1025 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 ARHGEF9O43307 516 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 CTSEP14091 401 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 ORC2Q13416 577 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PTK6Q13882 451 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 LY6KQ17RY6 165 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF280DQ6N043 979 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 C16orf59Q7L2K0 433 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 CALML6Q8TD86 181 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 MS4A14Q96JA4 679 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■□□□ 14.5
MCF2L-208ENST00000397030 WBP4O75554 376 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PDHBP11177 359 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 GCLCP48506 637 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 HDAC4P56524 1084 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 RPL10AP62906 217 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 MKL2Q9ULH7 1088 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 GHRP10912 638 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 FMO5P49326 533 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 FAM71DQ8N9W8 422 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PPP1R13LQ8WUF5 828 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 MCM8Q9UJA3 840 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 SLC16A3O15427 465 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 TBC1D4O60343 1298 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 AKAP5P24588 427 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 SERPINB4P48594 390 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PLD1Q13393 1074 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 FAM171A1Q5VUB5 890 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 KIAA1324Q6UXG2 1013 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 FGD2Q7Z6J4 655 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 LUZP2Q86TE4 346 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PDXKO00764 312 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 FAM107AO95990 144 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 TTLL9Q3SXZ7 439 aa18.13■□□□□ 0.49
MCF2L-208ENST00000397030 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 PAPOLBQ9NRJ5 636 aaKnown RBP18.13■□□□□ 0.49
MCF2L-208ENST00000397030 IGSF9BQ9UPX0 1349 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 FAXCQ5TGI0 409 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 HLA-DQA1Q5Y7H0 255 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 SERAC1Q96JX3 654 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 MTMR12Q9C0I1 747 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 UTP6Q9NYH9 597 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 EIF3DO15371 548 aaKnown RBP eCLIP18.12■□□□□ 0.493e-6■□□□□ 9
MCF2L-208ENST00000397030 NME5P56597 212 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 ITPK1Q13572 414 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 SPIRE2Q8WWL2 714 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 SOHLH2Q9NX45 425 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 FAM205CA6NFA0 338 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 POLBP06746 335 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 PTGER2P43116 358 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 CES5AQ6NT32 575 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 PRMT6Q96LA8 375 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 EXOSC4Q9NPD3 245 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 SLC2A3P11169 496 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 KCNK10P57789 538 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 XPO6Q96QU8 1125 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 KRCC1Q9NPI7 259 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 AMACRQ9UHK6 382 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 MYPNQ86TC9 1320 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 ZNF189O75820 626 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 SF3B3Q15393 1217 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 VPS37AQ8NEZ2 397 aa18.12■□□□□ 0.49
MCF2L-208ENST00000397030 CAB39Q9Y376 341 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
MCF2L-208ENST00000397030 VPS26AO75436 327 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 PTPAQ15257 358 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 BBS7Q8IWZ6 715 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 ARMC2Q8NEN0 867 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 MRPL1Q9BYD6 325 aaKnown RBP18.11■□□□□ 0.49
MCF2L-208ENST00000397030 MOXD2PA6NHM9 499 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 STRNO43815 780 aa18.11■□□□□ 0.49
MCF2L-208ENST00000397030 UGP2Q16851 508 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms