RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 DCAF4L1Q3SXM0 396 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 BOLA3Q53S33 107 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 SPDYAQ5MJ70 313 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 NAPEPLDQ6IQ20 393 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 DENND6AQ8IWF6 608 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 ACTRT1Q8TDG2 376 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF669Q96BR6 464 aaPredicted RBP10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 THAP2Q9H0W7 228 aa10.67□□□□□ -0.7
LIMCH1-203ENST00000396595 ENTPD3O75355 529 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CPB1P15086 417 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 KCNK10P57789 538 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 VEPH1Q14D04 833 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MTFR1Q15390 333 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF507Q8TCN5 953 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 RBBP8Q99708 897 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 IL25Q9H293 177 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 SLC30A1Q9Y6M5 507 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CAPN6Q9Y6Q1 641 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 FAM95CA0A1B0GW59 222 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF839A8K0R7 811 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 GLRA3O75311 464 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 PTK6Q13882 451 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CCDC142Q17RM4 750 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 INPP5DQ92835 1189 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CNDP1Q96KN2 507 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 SH2D3AQ9BRG2 576 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MXRA8Q9BRK3 442 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 AGPAT3Q9NRZ7 376 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MPP6Q9NZW5 540 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 HEY2Q9UBP5 337 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 C5orf58C9J3I9 102 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 XPO1O14980 1071 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MAGEB2O15479 319 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 NR3C2P08235 984 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 GTF2H1P32780 548 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 AKR1D1P51857 326 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 BTKQ06187 659 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 COG2Q14746 738 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF772Q68DY9 489 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 KDELC2Q7Z4H8 507 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 TNIP2Q8NFZ5 429 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 SMARCAD1Q9H4L7 1026 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 IPPQ9Y573 584 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CCDC78A2IDD5 438 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 SYNDIG1LA6NDD5 238 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CD4P01730 458 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ALBP02768 609 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 TXNP10599 105 aaKnown RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 TCN1P20061 433 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 BFSP2Q13515 415 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 MROH9Q5TGP6 573 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 SPATA2LQ8IUW3 424 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 FAM71DQ8N9W8 422 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 CAVIN3Q969G5 261 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 FAM111AQ96PZ2 611 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 FUCA2Q9BTY2 467 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ILKAPQ9H0C8 392 aaPredicted RBP10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 DCLRE1BQ9H816 532 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 JMJD4Q9H9V9 463 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 TMEM161AQ9NX61 479 aa10.66□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF263O14978 683 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 LCA5LO95447 670 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 FDFT1P37268 417 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 ACCSLQ4AC99 568 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 EFHC1Q5JVL4 640 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 CCNJLQ8IV13 435 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 EPS8L3Q8TE67 593 aaKnown RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 C17orf75Q9HAS0 396 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PIN4Q9Y237 131 aaKnown RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PTGER2P43116 358 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PRKCEQ02156 737 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 TTC33Q6PID6 262 aaPredicted RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 RAB42Q8N4Z0 105 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 RDM1Q8NG50 284 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 TAF4O00268 1085 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PON1P27169 355 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 RFX5P48382 616 aaPredicted RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 RGS4P49798 205 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PLOD1Q02809 727 aaPredicted RBP10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 TROAPQ12815 778 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 TTI2Q6NXR4 508 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 GJB7Q6PEY0 223 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 ANKS3Q6ZW76 656 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 P3H2Q8IVL5 708 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 FAM162AQ96A26 154 aa10.65□□□□□ -0.7
LIMCH1-203ENST00000396595 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms