RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TCP11X2Q5H9J9 407 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 C4orf50Q6ZRC1 276 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 DNAJB7Q7Z6W7 309 aaPredicted RBP17.63■□□□□ 0.41
CXCL1-201ENST00000395761 UNC93AQ86WB7 457 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 CRYBG2Q8N1P7 616 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 ELMOD1Q8N336 334 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 STKLD1Q8NE28 680 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 FAM200AQ8TCP9 573 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 FUBP3Q96I24 572 aaKnown RBP eCLIP17.63■□□□□ 0.41
CXCL1-201ENST00000395761 FAXDC2Q96IV6 333 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 TNIP3Q96KP6 325 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 MYADMQ96S97 322 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 TUBGCP2Q9BSJ2 902 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 CRACR2AQ9BSW2 395 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 INTS2Q9H0H0 1204 aaKnown RBP17.63■□□□□ 0.41
CXCL1-201ENST00000395761 CISHQ9NSE2 258 aa17.63■□□□□ 0.41
CXCL1-201ENST00000395761 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 CLDN5O00501 218 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 PRKCSHP14314 528 aaPredicted RBP17.62■□□□□ 0.41
CXCL1-201ENST00000395761 CCR2P41597 374 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 MYL5Q02045 173 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 MAN2A1Q16706 1144 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 VWA3BQ502W6 1294 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 ZNF394Q53GI3 561 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 PRSS36Q5K4E3 855 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 IQCEQ6IPM2 695 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 POTEHQ6S545 545 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 PAQR9Q6ZVX9 377 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 RRAGAQ7L523 313 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 GET4Q7L5D6 327 aaPredicted RBP17.62■□□□□ 0.41
CXCL1-201ENST00000395761 ARHGEF19Q8IW93 802 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 SCN4BQ8IWT1 228 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 C12orf29Q8N999 325 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 KAT5Q92993 513 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 TCEAL4Q96EI5 215 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 NT5C1BQ96P26 610 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 LRRC3Q9BY71 257 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 ZNF518BQ9C0D4 1074 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
CXCL1-201ENST00000395761 TMEM30AQ9NV96 361 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 USTQ9Y2C2 406 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 NR2E1Q9Y466 385 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 NOTCH4Q99466 2003 aa17.62■□□□□ 0.41
CXCL1-201ENST00000395761 MYL4P12829 197 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 EEF1GP26641 437 aaKnown RBP17.61■□□□□ 0.41
CXCL1-201ENST00000395761 GBP2P32456 591 aaPredicted RBP17.61■□□□□ 0.41
CXCL1-201ENST00000395761 MAGEA11P43364 429 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 CACNA2D1P54289 1103 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 APBA1Q02410 837 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 PHLDB3Q6NSJ2 640 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 OTOP3Q7RTS5 596 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 GAS2L3Q86XJ1 694 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 AOPEPQ8N6M6 819 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 UBR7Q8N806 425 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 ING5Q8WYH8 240 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 PSMG2Q969U7 264 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 NT5C1AQ9BXI3 368 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 HSD3B7Q9H2F3 369 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 AVENQ9NQS1 362 aaPredicted RBP17.61■□□□□ 0.41
CXCL1-201ENST00000395761 TAB2Q9NYJ8 693 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 GCNT4Q9P109 453 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 MRPS23Q9Y3D9 190 aaKnown RBP17.61■□□□□ 0.41
CXCL1-201ENST00000395761 ASB3Q9Y575 518 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 DENND4AQ7Z401 1863 aa17.61■□□□□ 0.41
CXCL1-201ENST00000395761 MOSPD3O75425 235 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 CCDC130P13994 396 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 GJA1P17302 382 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 SLC9A1P19634 815 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 GRIK1P39086 918 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 RAD23BP54727 409 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 EPHA5P54756 1037 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 RPL10AP62906 217 aaKnown RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 CYP4A22Q5TCH4 519 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 GBP6Q6ZN66 633 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 PDZD4Q76G19 769 aaPredicted RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 ITIH5Q86UX2 942 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 TMC8Q8IU68 726 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 DHX40Q8IX18 779 aaKnown RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 FUKQ8N0W3 1084 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 PPM1KQ8N3J5 372 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 TDRD5Q8NAT2 981 aaKnown RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 SLC4A11Q8NBS3 891 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 ST13P5Q8NFI4 369 aaPredicted RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 FGF13Q92913 245 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 ACSF2Q96CM8 615 aaPredicted RBP17.6■□□□□ 0.41
CXCL1-201ENST00000395761 MED10Q9BTT4 135 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 ASAH2Q9NR71 780 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 FAM49BQ9NUQ9 324 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 LIMD1Q9UGP4 676 aa17.6■□□□□ 0.41
CXCL1-201ENST00000395761 BDP1A6H8Y1 2624 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 HMGA1P17096 107 aaKnown RBP17.59■□□□□ 0.41
CXCL1-201ENST00000395761 CEBPBP17676 345 aa17.59■□□□□ 0.41
CXCL1-201ENST00000395761 ACO1P21399 889 aaKnown RBP17.59■□□□□ 0.41
CXCL1-201ENST00000395761 TBXAS1P24557 533 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms