RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DSPP15924 2871 aaKnown RBP17.07■□□□□ 0.32
SNCA-205ENST00000394991 WDFY3Q8IZQ1 3526 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 K7ENM7 598 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 KHNYNO15037 678 aaKnown RBP17.07■□□□□ 0.32
SNCA-205ENST00000394991 CEACAM1P13688 526 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 PSMD2Q13200 908 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 DUS2Q9NX74 493 aaKnown RBP17.07■□□□□ 0.32
SNCA-205ENST00000394991 LIMCH1Q9UPQ0 1083 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
SNCA-205ENST00000394991 TMEM8BA6NDV4 472 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
SNCA-205ENST00000394991 TISP43B9A030 160 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 ANKRD63C9JTQ0 380 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
SNCA-205ENST00000394991 CSH1P0DML2 217 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 CSH2P0DML3 217 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 ACOT2P49753 483 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 IRX4P78413 519 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 HMGN5P82970 282 aaKnown RBP17.06■□□□□ 0.32
SNCA-205ENST00000394991 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 EML3Q32P44 896 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 CYP2U1Q7Z449 544 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 RASSF3Q86WH2 238 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 EFCAB13Q8IY85 973 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 DCP1BQ8IZD4 617 aaKnown RBP17.06■□□□□ 0.32
SNCA-205ENST00000394991 FAM184AQ8NB25 1140 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 DEFB124Q8NES8 71 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 TSTD1Q8NFU3 115 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 FIZ1Q96SL8 496 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 ASB7Q9H672 318 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 ODF2LQ9ULJ1 636 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 C2CD2Q9Y426 696 aa17.06■□□□□ 0.32
SNCA-205ENST00000394991 NOL4O94818 638 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 IFNAR2P48551 515 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 ZNF131P52739 623 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
SNCA-205ENST00000394991 DDR2Q16832 855 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 CCDC142Q17RM4 750 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 KIAA1211LQ6NV74 962 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 KCTD17Q8N5Z5 321 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 USP33Q8TEY7 942 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 ZCCHC14Q8WYQ9 949 aaKnown RBP17.05■□□□□ 0.32
SNCA-205ENST00000394991 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 CYP2S1Q96SQ9 504 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 TMEM206Q9H813 350 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 DMXL2Q8TDJ6 3036 aa17.05■□□□□ 0.32
SNCA-205ENST00000394991 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 HNRNPLP14866 589 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNCA-205ENST00000394991 OPRD1P41143 372 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 SEC13P55735 322 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 ACAP1Q15027 740 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 UAP1L1Q3KQV9 507 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
SNCA-205ENST00000394991 USP39Q53GS9 565 aaKnown RBP17.04■□□□□ 0.32
SNCA-205ENST00000394991 ANO7Q6IWH7 933 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 C11orf74Q86VG3 221 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 MDGA1Q8NFP4 955 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
SNCA-205ENST00000394991 TRMT2BQ96GJ1 504 aaKnown RBP17.04■□□□□ 0.32
SNCA-205ENST00000394991 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
SNCA-205ENST00000394991 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 IKZF4Q9H2S9 585 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
SNCA-205ENST00000394991 VWA3AA6NCI4 1184 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 K7EQS6 105 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 CKMP06732 381 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 USP17L7P0C7H9 530 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 CYP2F1P24903 491 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 DHPSP49366 369 aaPredicted RBP17.03■□□□□ 0.32
SNCA-205ENST00000394991 TSPY1Q01534 308 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 SV2CQ496J9 727 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 C2orf27AQ580R0 203 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 CRELD2Q6UXH1 353 aaPredicted RBP17.03■□□□□ 0.32
SNCA-205ENST00000394991 ARL14EPQ8N8R7 260 aaPredicted RBP17.03■□□□□ 0.32
SNCA-205ENST00000394991 PIGKQ92643 395 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 LINC00597Q9H2U6 94 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 UXTQ9UBK9 157 aaPredicted RBP17.03■□□□□ 0.32
SNCA-205ENST00000394991 L1RE1Q9UN81 338 aa17.03■□□□□ 0.32
SNCA-205ENST00000394991 PCDH15Q96QU1 1955 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 TRAV19A0A0A6YYK7 116 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 C2orf78A6NCI8 922 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 HYAL3O43820 417 aaPredicted RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 TRAK2O60296 914 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 FAM13AO94988 1023 aa17.02■□□□□ 0.32
SNCA-205ENST00000394991 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
SNCA-205ENST00000394991 SCP2P22307 547 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms