RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TMEM62Q0P6H9 643 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 KIZQ2M2Z5 673 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 SMTNL2Q2TAL5 461 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 TFDP3Q5H9I0 405 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 CHADLQ6NUI6 762 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 NLRP14Q86W24 1093 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 CABS1Q96KC9 395 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 CCT8L2Q96SF2 557 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 CEP350Q5VT06 3117 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 KAT6AQ92794 2004 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 TJP3O95049 919 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 CYP3A5P20815 502 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 PSMA2P25787 234 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 HOXA11P31270 313 aaPredicted RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 AUHQ13825 339 aaKnown RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 KCNT1Q5JUK3 1230 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ZNF365Q70YC5 407 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 CCDC89Q8N998 374 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ACAP3Q96P50 834 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ABHD16BQ9H3Z7 469 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 METTL5Q9NRN9 209 aaKnown RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 DPP3Q9NY33 737 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 C2CD2Q9Y426 696 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 LRRD1A4D1F6 860 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 E7EVH7 732 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ZSCAN5DPP0CG00 497 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 MMP13P45452 471 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 COPS2P61201 443 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 INCA1Q0VD86 236 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 SWT1Q5T5J6 900 aaKnown RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 DRICH1Q6PGQ1 229 aaPredicted RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 POLNQ7Z5Q5 900 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 OR6J1Q8NGC5 347 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ZNF473Q8WTR7 871 aaKnown RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 N4BP2L2Q92802 583 aaPredicted RBP14.7□□□□□ -0.06
SNCA-204ENST00000394989 HAUS1Q96CS2 278 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 ADAMTS10Q9H324 1103 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 CYP3A43Q9HB55 503 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 CDHR5Q9HBB8 845 aa14.7□□□□□ -0.06
SNCA-204ENST00000394989 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 RGS16O15492 202 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 ETS1P14921 441 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 GABRB2P47870 512 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 OASLQ15646 514 aaKnown RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 KYNUQ16719 465 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 DGKDQ16760 1214 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 LONRF1Q17RB8 773 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 FNIP1Q8TF40 1166 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 ITGA11Q9UKX5 1188 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 SCN1AP35498 2009 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 SKAP2O75563 359 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 TTC4O95801 387 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 FAM107AO95990 144 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 NDST1P52848 882 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 CAV1Q03135 178 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 FAM110CQ1W6H9 321 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 P3H1Q32P28 736 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 IZUMO3Q5VZ72 239 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 HIBCHQ6NVY1 386 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 ZMAT2Q96NC0 199 aaKnown RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 M0QYV0 167 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 RASGRF2O14827 1237 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 PRAMEF19Q5SWL8 479 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 SPRYD7Q5W111 196 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 GSTA5Q7RTV2 222 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 PLEKHH3Q7Z736 793 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 ZNF410Q86VK4 478 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 ALLCQ8N6M5 410 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 UBA3Q8TBC4 463 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 MCRS1Q96EZ8 462 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 ZWILCHQ9H900 591 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 DDX56Q9NY93 547 aaKnown RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 BARX2Q9UMQ3 279 aaPredicted RBP14.69□□□□□ -0.06
SNCA-204ENST00000394989 GINS2Q9Y248 185 aa14.69□□□□□ -0.06
SNCA-204ENST00000394989 PPEF2O14830 753 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 GPR32O75388 356 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 CD48P09326 243 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 CETN2P41208 172 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 GRM5P41594 1212 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 HIC1Q14526 733 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 CNGA2Q16280 664 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 KYAT1Q16773 422 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 MFSD5Q6N075 450 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 C12orf29Q8N999 325 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 KIF12Q96FN5 646 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 PIWIL1Q96J94 861 aaKnown RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 HEXIM2Q96MH2 286 aaKnown RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 NINJ2Q9NZG7 142 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 STAU1O95793 577 aaKnown RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 AGTP01019 485 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 HMGCRP04035 888 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 ZNF268Q14587 947 aaPredicted RBP14.68□□□□□ -0.06
SNCA-204ENST00000394989 TAF5Q15542 800 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 TRNP1Q6NT89 227 aa14.68□□□□□ -0.06
SNCA-204ENST00000394989 DPH6Q7L8W6 267 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms