RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NR1H3Q13133 447 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 EDRF1Q3B7T1 1238 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CWF19L1Q69YN2 538 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 PIGWQ7Z7B1 504 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PDZD8Q8NEN9 1154 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SYN2Q92777 582 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 NACC1Q96RE7 527 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CSRNP1Q96S65 589 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 GMLQ99445 158 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 ZNF184Q99676 751 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 TDRD3Q9H7E2 651 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 EBF2Q9HAK2 575 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PTPRHQ9HD43 1115 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PSMC3IPQ9P2W1 217 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 IPO5O00410 1097 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 DDX3YO15523 660 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 ATP5HO75947 161 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 EGFRP00533 1210 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PROCP04070 461 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CYP11B1P15538 503 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PKNOX1P55347 436 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 PHEXP78562 749 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 GPATCH4Q5T3I0 446 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 CES3Q6UWW8 571 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 IFNEQ86WN2 208 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SCUBE1Q8IWY4 988 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CCNYL1Q8N7R7 359 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 C7orf31Q8N865 590 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SGF29Q96ES7 293 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 ACCSQ96QU6 501 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 TUBGCP5Q96RT8 1024 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 GPATCH2LQ9NWQ4 482 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CCPG1Q9ULG6 757 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 APOBEC2Q9Y235 224 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 ASTN1O14525 1302 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 NOL3O60936 208 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 ZNF189O75820 626 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 CSPG5O95196 566 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 VCAM1P19320 739 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CCR3P51677 355 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 OTUD4Q01804 1114 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 SNRNP35Q16560 246 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 ACBD5Q5T8D3 534 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 RNF135Q8IUD6 432 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 KLHL4Q9C0H6 718 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 RANBP17Q9H2T7 1088 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 LIN28AQ9H9Z2 209 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 RNF19AQ9NV58 838 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SLC9A2Q9UBY0 812 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 MCF2LO15068 1137 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 ZWINTO95229 277 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 TOP3BO95985 862 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 SRGAP2CP0DJJ0 459 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SETSIPP0DME0 302 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 ARP10275 920 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 IFRD2Q12894 506 aaPredicted RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 MFSD7Q6UXD7 560 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 RIPOR1Q6ZS17 1223 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 SATL1Q86VE3 508 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.23□□□□□ -0.93
RTN4-206ENST00000394611 TSNARE1Q96NA8 513 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 MTMR9Q96QG7 549 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 KCTD10Q9H3F6 313 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 C17orf75Q9HAS0 396 aa9.23□□□□□ -0.93
RTN4-206ENST00000394611 CHCHD3Q9NX63 227 aaKnown RBP9.23□□□□□ -0.93
RTN4-206ENST00000394611 FOXD2O60548 495 aaPredicted RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 LYPLA1O75608 230 aaPredicted RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 GM2AP17900 193 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CA8P35219 290 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CSE1LP55060 971 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 MGAT5Q09328 741 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 DYNC1I2Q13409 638 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 MAPK6Q16659 721 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 Q3C1V9 767 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 RINLQ6ZS11 566 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 TRIM67Q6ZTA4 783 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 RHOT1Q8IXI2 618 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 GPC2Q8N158 579 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 PARP8Q8N3A8 854 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 GABPB2Q8TAK5 448 aaPredicted RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 MRPL1Q9BYD6 325 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 ZDHHC18Q9NUE0 388 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 DAGLAQ9Y4D2 1042 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CNTRLQ7Z7A1 2325 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 TJP3O95049 919 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 ECE1P42892 770 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CRKP46108 304 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 NME5P56597 212 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 C16orf72Q14CZ0 275 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 ZFPM1Q8IX07 1006 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 DEFB107AQ8IZN7 70 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms