RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 AHI1Q8N157 1196 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 OSCP1Q8WVF1 389 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 BTBD9Q96Q07 612 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 TSG101Q99816 390 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 ANAPC5Q9UJX4 755 aa13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 GNEQ9Y223 722 aaKnown RBP13.1□□□□□ -0.31
SLC28A1-203ENST00000394573 TNPO2O14787 897 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 SPOPO43791 374 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 GABBR2O75899 941 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 BAIAP3O94812 1187 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 TECP42680 631 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 BMXP51813 675 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 IFITM2Q01629 132 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 FUT2Q10981 343 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 GRIK5Q16478 980 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 SRBD1Q8N5C6 995 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 LILRB4Q8NHJ6 448 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 C7orf25Q9BPX7 421 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 B3GNT4Q9C0J1 378 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 NR2E3Q9Y5X4 410 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 TSPOAP1O95153 1857 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 GMNNO75496 209 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 BGNP21810 368 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 PPATQ06203 517 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 MESDQ14696 234 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 C4orf22Q6V702 233 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 HPS6Q86YV9 775 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 SLC15A4Q8N697 577 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 PCYOX1LQ8NBM8 494 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 TCP10LQ8TDR4 215 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 MTO1Q9Y2Z2 717 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 PCDHGA11Q9Y5H2 935 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 C3P01024 1663 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 CLDN3O15551 220 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 PRPF4O43172 522 aaKnown RBP eCLIP13.09□□□□□ -0.313e-6■■■■□ 20.9
SLC28A1-203ENST00000394573 DENRO43583 198 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 SULT1C4O75897 302 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 RFC1P35251 1148 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 OTUD4Q01804 1114 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 MTM1Q13496 603 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 KIAA2013Q8IYS2 634 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ALLCQ8N6M5 410 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 STRBPQ96SI9 672 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 Q9H521 79 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ST14Q9Y5Y6 855 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
SLC28A1-203ENST00000394573 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.31
SLC28A1-203ENST00000394573 SYNGAP1Q96PV0 1343 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 MYO1DO94832 1006 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 CRYZL1O95825 349 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 RRM1P23921 792 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 IL4RP24394 825 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 HOXC9P31274 260 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 STAT3P40763 770 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 CASP5P51878 434 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TUBA1BP68363 451 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 FOXO4P98177 505 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 FGD3Q5JSP0 725 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 LDLRAP1Q5SW96 308 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TUBA1AQ71U36 451 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ADGRG6Q86SQ4 1221 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TBC1D15Q8TC07 691 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF398Q8TD17 642 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 WRNIP1Q96S55 665 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms