RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 MTTPP55157 894 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 PTP4A2Q12974 167 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 EFHC2Q5JST6 749 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 PRAMEF18Q5VWM3 479 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 IZUMO3Q5VZ72 239 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 C1orf54Q8WWF1 131 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 UNC45AQ9H3U1 944 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 GTF3C4Q9UKN8 822 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 PCDHA12Q9UN75 941 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 MTMR7Q9Y216 660 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 hCG_2014768A0A024R1R8 64 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 LRRN2O75325 713 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 DHRS4L1P0CG22 281 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 PRKD1Q15139 912 aaPredicted RBP22.82■■□□□ 1.24
CLDND1-202ENST00000394180 ARSHQ5FYA8 562 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 SYCP2LQ5T4T6 812 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 HAS1Q92839 578 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 INTS2Q9H0H0 1204 aaKnown RBP22.82■■□□□ 1.24
CLDND1-202ENST00000394180 DEFB129Q9H1M3 183 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.82■■□□□ 1.241e-6■■■□□ 18.4
CLDND1-202ENST00000394180 GGA3Q9NZ52 723 aa22.82■■□□□ 1.24
CLDND1-202ENST00000394180 COL2A1P02458 1487 aaPredicted RBP22.82■■□□□ 1.24
CLDND1-202ENST00000394180 C15orf38-AP3S2A0A0A6YYH1 394 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TMEM247A6NEH6 219 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 E9PMD0 336 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 EIF3DO15371 548 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 CLDN3O15551 220 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 RRM1P23921 792 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 ADCY7P51828 1080 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 SFT2D3Q587I9 215 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TATDN1Q6P1N9 297 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 KLHL35Q6PF15 583 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 ARPINQ7Z6K5 226 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TMEM126BQ8IUX1 230 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 RBM15BQ8NDT2 890 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 ZNF564Q8TBZ8 553 aaPredicted RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TRPC4APQ8TEL6 797 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 KIAA1024Q9UPX6 916 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 MATN2O00339 956 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TRMUO75648 421 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 JAG1P78504 1218 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 ERI1Q8IV48 349 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 FAM186BQ8IYM0 893 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 C4orf33Q8N1A6 199 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TEPSINQ96N21 525 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 HNRNPABQ99729 332 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TMEM47Q9BQJ4 181 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 UBA5Q9GZZ9 404 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 PLGRKTQ9HBL7 147 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 CHST7Q9NS84 486 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 SEPT11Q9NVA2 429 aaKnown RBP22.81■■□□□ 1.24
CLDND1-202ENST00000394180 ZNF536O15090 1300 aa22.81■■□□□ 1.24
CLDND1-202ENST00000394180 TMEM110-MUSTN1A8MSY1 372 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 CCNT2O60583 730 aaKnown RBP22.8■■□□□ 1.24
CLDND1-202ENST00000394180 PDE5AO76074 875 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 TNNI2P48788 182 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 GALK1P51570 392 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 GRAMD4Q6IC98 578 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 PALB2Q86YC2 1186 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 ALOX15BO15296 676 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 TNFAIP8O95379 198 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 HOXD12P35452 270 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 PIK3CAP42336 1068 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 CASP5P51878 434 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 TNFAIP1Q13829 316 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 LPIN1Q14693 890 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 PACS1Q6VY07 963 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 PATL1Q86TB9 770 aaKnown RBP22.8■■□□□ 1.24
CLDND1-202ENST00000394180 ICA1LQ8NDH6 482 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 ABHD8Q96I13 439 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 DNAJC1Q96KC8 554 aaKnown RBP22.8■■□□□ 1.24
CLDND1-202ENST00000394180 RIOX1Q9H6W3 641 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 RAB26Q9ULW5 256 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 TMEM98Q9Y2Y6 226 aa22.8■■□□□ 1.24
CLDND1-202ENST00000394180 UBE4BO95155 1302 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 CD48P09326 243 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 PLS3P13797 630 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 NR1H2P55055 460 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 PPIDQ08752 370 aaKnown RBP22.79■■□□□ 1.24
CLDND1-202ENST00000394180 EAPPQ56P03 285 aaPredicted RBP22.79■■□□□ 1.24
CLDND1-202ENST00000394180 EFHC1Q5JVL4 640 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 TRIM67Q6ZTA4 783 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 NLRP4Q96MN2 994 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 MAK16Q9BXY0 300 aaKnown RBP22.79■■□□□ 1.24
CLDND1-202ENST00000394180 OLFML3Q9NRN5 406 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 ADARB2Q9NS39 739 aaKnown RBP22.79■■□□□ 1.24
CLDND1-202ENST00000394180 MTMR4Q9NYA4 1195 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 AK5Q9Y6K8 562 aa22.79■■□□□ 1.24
CLDND1-202ENST00000394180 TTLL13PA6NNM8 815 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 F5H6K3 240 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 H3BRJ5 948 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 STK10O94804 968 aaKnown RBP22.78■■□□□ 1.24
CLDND1-202ENST00000394180 ADRA1DP25100 572 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 KLRC2P26717 231 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 ADSSP30520 456 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 STIP1P31948 543 aaKnown RBP22.78■■□□□ 1.24
CLDND1-202ENST00000394180 ARL4CP56559 192 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 NADK2Q4G0N4 442 aa22.78■■□□□ 1.24
CLDND1-202ENST00000394180 DLK2Q6UY11 383 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms