RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CFAP221Q4G0U5 840 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 Q6ZS52 159 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 WDR49Q8IV35 697 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 NELFCDQ8IXH7 590 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CELF5Q8N6W0 485 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 ATRIPQ8WXE1 791 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 RUBCNQ92622 972 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 MSANTD3Q96H12 275 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 MYRFLQ96LU7 910 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 GCNAQ96QF7 691 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 FAM83CQ9BQN1 747 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CRTAC1Q9NQ79 661 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 MAGED2Q9UNF1 606 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 OTOL1A6NHN0 477 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 CSH1P0DML2 217 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 CSH2P0DML3 217 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 HOXC13P31276 330 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 DNM1Q05193 864 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 SURF1Q15526 300 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 DPH6Q7L8W6 267 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 TRAPPC11Q7Z392 1133 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 RALGPS2Q86X27 583 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 GRAMD1CQ8IYS0 662 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 SPRYD3Q8NCJ5 442 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 ZNF516Q92618 1163 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 SLC22A12Q96S37 553 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 EPC1Q9H2F5 836 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 HPS4Q9NQG7 708 aa19.56■□□□□ 0.72
PDLIM7-205ENST00000393551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 TNNC2P02585 160 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 AFMP43652 599 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 ID4P47928 161 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 ME1P48163 572 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 CYP2J2P51589 502 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 PSMC1P62191 440 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 CYP24A1Q07973 514 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 MYO1EQ12965 1108 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 CCINQ13939 588 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 PON2Q15165 354 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 TRIM68Q6AZZ1 485 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 TRMT2BQ96GJ1 504 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 CHAMP1Q96JM3 812 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 IER2Q9BTL4 223 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 MAGEF1Q9HAY2 307 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 KIAA1586Q9HCI6 787 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 SLC39A2Q9NP94 309 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 GKN1Q9NS71 199 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 ZMYM5Q9UJ78 669 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 RCOR1Q9UKL0 485 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
PDLIM7-205ENST00000393551 UBE4BO95155 1302 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 KLRC4O43908 158 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 DLATP10515 647 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 DDX6P26196 483 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 PCSK1P29120 753 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 AVPR1AP37288 418 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 CCR3P51677 355 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 RPL10AP62906 217 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 PLCB2Q00722 1185 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 DMWDQ09019 674 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 PSMD6Q15008 389 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 C1orf228Q6PIY5 440 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 SPATA2LQ8IUW3 424 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 SPEM1Q8N4L4 309 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 PLEKHO2Q8TD55 490 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 CCDC127Q96BQ5 260 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 RMDN1Q96DB5 314 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 FUBP3Q96I24 572 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 SYT15Q9BQS2 421 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 MRPL45Q9BRJ2 306 aaKnown RBP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 FAM126AQ9BYI3 521 aaPredicted RBP19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 TDP1Q9NUW8 608 aa19.54■□□□□ 0.72
PDLIM7-205ENST00000393551 PVALEFA0A1B0GWK0 134 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 SOBPA7XYQ1 873 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 ACTN4O43707 911 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 PDGFRBP09619 1106 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 WARSP23381 471 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 MAGEA11P43364 429 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 CXCL12P48061 93 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 ITPRIPL2Q3MIP1 535 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 C12orf56Q8IXR9 622 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 XXYLT1Q8NBI6 393 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 MRPS31Q92665 395 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 MYLPFQ96A32 169 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 CYP2S1Q96SQ9 504 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 CGRRF1Q99675 332 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 HINFPQ9BQA5 517 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 EBF3Q9H4W6 596 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 SERTAD1Q9UHV2 236 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 CDH9Q9ULB4 789 aa19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 SMG5Q9UPR3 1016 aaKnown RBP19.53■□□□□ 0.72
PDLIM7-205ENST00000393551 K7ESF4 209 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 ARSAP15289 507 aa19.52■□□□□ 0.72
PDLIM7-205ENST00000393551 TNNI1P19237 187 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms