RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LRMPQ12912 555 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 VSTM1Q6UX27 236 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 C11orf57Q6ZUT1 292 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 SCN4BQ8IWT1 228 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 NT5C1BQ96P26 610 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 MYADMQ96S97 322 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 LPIN3Q9BQK8 851 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 NT5C1AQ9BXI3 368 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 SAMSN1Q9NSI8 373 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 ZFP37Q9Y6Q3 630 aaPredicted RBP20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 CILPO75339 1184 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 MYL4P12829 197 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 ATF6P18850 670 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 TBXAS1P24557 533 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 GRIK1P39086 918 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 EPHA5P54756 1037 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 CUL2Q13617 745 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 MAN2A1Q16706 1144 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 DDR2Q16832 855 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 HSP90AA4PQ58FG1 418 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 RNF135Q8IUD6 432 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 MED10Q9BTT4 135 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 B3GNT5Q9BYG0 378 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 NAT10Q9H0A0 1025 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 CISHQ9NSE2 258 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 LIMD1Q9UGP4 676 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 CDH7Q9ULB5 785 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 NOTCH4Q99466 2003 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 ATP8B3O60423 1300 aa20.22■□□□□ 0.83
PDLIM7-204ENST00000393546 VCANP13611 3396 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 KCNJ18B7U540 433 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 MICAL2O94851 1124 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 FGF19O95750 216 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 CSH1P0DML2 217 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 CSH2P0DML3 217 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 LAMP2P13473 410 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 GPR15P49685 360 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 ORC1Q13415 861 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 KCNJ12Q14500 433 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 LMO3Q8TAP4 145 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 GPR152Q8TDT2 470 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 FGF13Q92913 245 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 TUBGCP2Q9BSJ2 902 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 LRRC3Q9BY71 257 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 ELOVL4Q9GZR5 314 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 EPS15L1Q9UBC2 864 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 HMGXB4Q9UGU5 601 aa20.21■□□□□ 0.83
PDLIM7-204ENST00000393546 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 EEF1GP26641 437 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 ANXA13P27216 316 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 MYL5Q02045 173 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 SLC5A9Q2M3M2 681 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 TCP11X2Q5H9J9 407 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 PRSS36Q5K4E3 855 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 SDHAF4Q5VUM1 108 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 GBP6Q6ZN66 633 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 TMC8Q8IU68 726 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 WHAMMQ8TF30 809 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 ING5Q8WYH8 240 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 TCEAL4Q96EI5 215 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 CEP295NLQ96MC4 621 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 TWNKQ96RR1 684 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 ARID3AQ99856 593 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 INTS2Q9H0H0 1204 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 GDE1Q9NZC3 331 aa20.2■□□□□ 0.82
PDLIM7-204ENST00000393546 BDP1A6H8Y1 2624 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 MYO10Q9HD67 2058 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 CLDN5O00501 218 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 TRIM66O15016 1216 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 CCR2P41597 374 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 ANO6Q4KMQ2 910 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 VWA3BQ502W6 1294 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 ZNF394Q53GI3 561 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 PPM1KQ8N3J5 372 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 C12orf29Q8N999 325 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 MCRS1Q96EZ8 462 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 TMEM176AQ96HP8 235 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 SPATA17Q96L03 361 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 C8orf48Q96LL4 319 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 HEXIM2Q96MH2 286 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 ZNF518BQ9C0D4 1074 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 NDST4Q9H3R1 872 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 FANCLQ9NW38 375 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 GCNT4Q9P109 453 aa20.19■□□□□ 0.82
PDLIM7-204ENST00000393546 GTPBP10A4D1E9 387 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 SLC38A8A6NNN8 435 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 CEBPBP17676 345 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 GABRR2P28476 465 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 PAQR9Q6ZVX9 377 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 FAM35AQ86V20 835 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 NXPE3Q969Y0 559 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 GCNAQ96QF7 691 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 ZNF334Q9HCZ1 680 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 FAM49BQ9NUQ9 324 aa20.18■□□□□ 0.82
PDLIM7-204ENST00000393546 IGSF9Q9P2J2 1179 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms