RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 IL31RAQ8NI17 732 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 HIC2Q96JB3 615 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 FAM20AQ96MK3 541 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 CALN1Q9BXU9 219 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 IL1RAPL1Q9NZN1 696 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 TJP2Q9UDY2 1190 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 SLC7A8Q9UHI5 535 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 CLUHO75153 1309 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ANKRD33BA6NCL7 494 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 TYROBPO43914 113 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ANXA13P27216 316 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 SREBF1P36956 1147 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 WNT7BP56706 349 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 GABPAQ06546 454 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 GK3PQ14409 553 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 LBRQ14739 615 aaKnown RBP15.24■□□□□ 0.03
SFXN3-202ENST00000393459 CHI3L2Q15782 390 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 SFT2D3Q587I9 215 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 VWA5B1Q5TIE3 1220 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 KRT39Q6A163 491 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 SCUBE1Q8IWY4 988 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ZCCHC9Q8N567 271 aaKnown RBP15.24■□□□□ 0.03
SFXN3-202ENST00000393459 HELQQ8TDG4 1101 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 PRPF31Q8WWY3 499 aaKnown RBP15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ATXN7L3BQ96GX2 97 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 ASCC2Q9H1I8 757 aaPredicted RBP15.24■□□□□ 0.03
SFXN3-202ENST00000393459 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 TELO2Q9Y4R8 837 aa15.24■□□□□ 0.03
SFXN3-202ENST00000393459 EIF2AK2P19525 551 aaKnown RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 GEMIN4P57678 1058 aaKnown RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 UGCGQ16739 394 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 CLEC16AQ2KHT3 1053 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 MROH9Q5TGP6 573 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 HSPH1Q92598 858 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 LIN28AQ9H9Z2 209 aaKnown RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 LGALS13Q9UHV8 139 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 DNALI1O14645 258 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 APBA3O96018 575 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 INHBAP08476 426 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 GRIA2P42262 883 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 COG7P83436 770 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 CCDC15Q0P6D6 951 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 TAF5Q15542 800 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 NPNTQ6UXI9 565 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 GALNT4Q8N4A0 578 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 DRAXINQ8NBI3 349 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 SMC1BQ8NDV3 1235 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 SHC3Q92529 594 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 PGLYRP2Q96PD5 576 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 MAN1C1Q9NR34 630 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 EIF3DO15371 548 aaKnown RBP eCLIP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 NCF2P19878 526 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 TCN1P20061 433 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 AP1B1Q10567 949 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 PDCD2Q16342 344 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 PTAR1Q7Z6K3 402 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 ULK2Q8IYT8 1036 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 TTLL6Q8N841 843 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 CCDC110Q8TBZ0 833 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 RSAD2Q8WXG1 361 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 ECSITQ9BQ95 431 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
SFXN3-202ENST00000393459 C1orf112Q9NSG2 853 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 MAD1L1Q9Y6D9 718 aa15.23■□□□□ 0.03
SFXN3-202ENST00000393459 IGLV3-22A0A075B6J6 115 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 CLRN2A0PK11 232 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 TRIM49D1C9J1S8 452 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-202ENST00000393459 DGKIO75912 1065 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 CYP3A7P24462 503 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 CDK16Q00536 496 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 CLUL1Q15846 466 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 C6orf163Q5TEZ5 329 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 SIAH1Q8IUQ4 282 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 ACTL9Q8TC94 416 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 GATA6Q92908 595 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 SPATA16Q9BXB7 569 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 GRIP2Q9C0E4 1043 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
SFXN3-202ENST00000393459 KCNK13Q9HB14 408 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 SMG5Q9UPR3 1016 aaKnown RBP15.22■□□□□ 0.03
SFXN3-202ENST00000393459 LIASO43766 372 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 FOXD2O60548 495 aaPredicted RBP15.22■□□□□ 0.03
SFXN3-202ENST00000393459 GZMAP12544 262 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 CD1EP15812 388 aa15.22■□□□□ 0.03
SFXN3-202ENST00000393459 SMARCA1P28370 1054 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms