RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 POTEAQ6S8J7 498 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FRMD7Q6ZUT3 714 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ADCK2Q7Z695 626 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CDKL3Q8IVW4 592 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 SRBD1Q8N5C6 995 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 USP38Q8NB14 1042 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 BAP1Q92560 729 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FIG4Q92562 907 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LARP4BQ92615 738 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.39□□□□□ -1.87
PHF3-202ENST00000393387 PFDN5Q99471 154 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SSX3Q99909 188 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ADPGKQ9BRR6 497 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TTYH1Q9H313 450 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 TASP1Q9H6P5 420 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MANSC1Q9H8J5 431 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TREM1Q9NP99 234 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MAP3K20Q9NYL2 800 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 PHTF1Q9UMS5 762 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SH3BP1Q9Y3L3 701 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LOC100509620A0A075B734 347 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 I3L521 148 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TMCC2O75069 709 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 EPHB2P29323 1055 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CDC25AP30304 524 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 COPAP53621 1224 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 KCNK10P57789 538 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CBLBQ13191 982 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ALCAMQ13740 583 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 Q3C1V9 767 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TBCELQ5QJ74 424 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 GALNT17Q6IS24 598 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 DSG4Q86SJ6 1040 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TTC6Q86TZ1 520 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PYDC1Q8WXC3 89 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ZNF274Q96GC6 653 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 DNAJC1Q96KC8 554 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 RBBP8Q99708 897 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 THUMPD3Q9BV44 507 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 ZNF212Q9UDV6 495 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LEF1Q9UJU2 399 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 GGA2Q9UJY4 613 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PACSIN3Q9UKS6 424 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SLC8A2Q9UPR5 921 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PNMA8CA0A1B0GUJ8 204 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TESPA1A2RU30 521 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 TVP23AA6NH52 213 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 H0Y858 1186 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 STARD3NLO95772 234 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SERPING1P05155 500 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FBLN1P23142 703 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TTKP33981 857 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CSTF3Q12996 717 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 RAPSNQ13702 412 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ZIK1Q3SY52 487 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 XKR9Q5GH70 373 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 INTS6LQ5JSJ4 861 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 ADALQ6DHV7 355 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ITPRIPL1Q6GPH6 555 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FBXO42Q6P3S6 717 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FAM131AQ6UXB0 335 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ZBTB49Q6ZSB9 765 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TTLL7Q6ZT98 887 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PTF1AQ7RTS3 328 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 FAM160B2Q86V87 743 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 DPP10Q8N608 796 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 RASGRP4Q8TDF6 673 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 EPS8L3Q8TE67 593 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 OSCP1Q8WVF1 389 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SEMA4DQ92854 862 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 HEXIM2Q96MH2 286 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 PANX2Q96RD6 677 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 C7orf50Q9BRJ6 194 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 EMILIN2Q9BXX0 1053 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 IRX2Q9BZI1 471 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 PLGRKTQ9HBL7 147 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LMCD1Q9NZU5 365 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 DDX25Q9UHL0 483 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 TRMT6Q9UJA5 497 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 CROTQ9UKG9 612 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PCDHGB4Q9UN71 923 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CARMIL1Q5VZK9 1371 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TDRD9Q8NDG6 1382 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 UBE2QL1A1L167 161 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 ARL5CA6NH57 179 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 AURKAO14965 403 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 UBOX5O94941 541 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LDHBP07195 334 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 FGFR2P21802 821 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 LHCGRP22888 699 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 NR2F2P24468 414 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 DDX6P26196 483 aaKnown RBP eCLIP3.39□□□□□ -1.877e-7■■■□□ 15.9
PHF3-202ENST00000393387 CHI3L1P36222 383 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 HK2P52789 917 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TPTEP56180 551 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SSTP61278 116 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MGAT5Q09328 741 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MPP3Q13368 585 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 DDR2Q16832 855 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms