RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 DPH6Q7L8W6 267 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC44A3Q8N4M1 653 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 PSMG2Q969U7 264 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASIC4Q96FT7 647 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 PCED1BQ96HM7 432 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 MED15Q96RN5 788 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TWNKQ96RR1 684 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ARID3AQ99856 593 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZNF518BQ9C0D4 1074 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 ATXN3LQ9H3M9 355 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMEM8AQ9HCN3 771 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 AVENQ9NQS1 362 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMEM30AQ9NV96 361 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CDH9Q9ULB4 789 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAFFQ9ULX9 164 aa8.19□□□□□ -1.1
HMGB3P1-201ENST00000393368 CCDC130P13994 396 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 HMGA1P17096 107 aaKnown RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 PTPN1P18031 435 aaKnown RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 VIPR2P41587 438 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 NDST1P52848 882 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 EPHA5P54756 1037 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 USP46P62068 366 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 SIGLEC14Q08ET2 396 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 LRMPQ12912 555 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 GRM2Q14416 872 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 VEPH1Q14D04 833 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 TAF12Q16514 161 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 DPCR1Q3MIW9 517 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 CCDC40Q4G0X9 1142 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 KRT39Q6A163 491 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 TANGO2Q6ICL3 276 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 ACOT1Q86TX2 421 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 ITIH5Q86UX2 942 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 B3GALNT2Q8NCR0 500 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 SPATA18Q8TC71 538 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 C2orf15Q8WU43 125 aaKnown RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 TATDN2Q93075 761 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC35C1Q96A29 364 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 RSPRY1Q96DX4 576 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 B3GNT5Q9BYG0 378 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 SMG9Q9H0W8 520 aaKnown RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 NUP62CLQ9H1M0 184 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLITRK6Q9H5Y7 841 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 IL21Q9HBE4 155 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 IGSF9Q9P2J2 1179 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 HSFX1Q9UBD0 423 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 ARMCX3Q9UH62 379 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 CA14Q9ULX7 337 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 DUSP12Q9UNI6 340 aa8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 MTCL1Q9Y4B5 1905 aaKnown RBP8.18□□□□□ -1.1
HMGB3P1-201ENST00000393368 NOTCH4Q99466 2003 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC38A8A6NNN8 435 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 F8VP50 259 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZNF197O14709 1029 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 TADA3O75528 432 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 PRAMEF12O95522 483 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 P4HA1P13674 534 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 GRIK1P39086 918 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 VCPP55072 806 aaKnown RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 GPC5P78333 572 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 SMARCB1Q12824 385 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 IFRD2Q12894 506 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 CFAP221Q4G0U5 840 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZNF394Q53GI3 561 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 HSP90AA4PQ58FG1 418 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 GPR158Q5T848 1215 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 C4orf50Q6ZRC1 276 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 TMEM150AQ86TG1 271 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 UBALD2Q8IYN6 164 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 SIX5Q8N196 739 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 C12orf29Q8N999 325 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 TRIML1Q8N9V2 468 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 FBXL13Q8NEE6 735 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZSCAN18Q8TBC5 510 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC39A7Q92504 469 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 TAF4BQ92750 862 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 PBXIP1Q96AQ6 731 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 CEP63Q96MT8 703 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASB16Q96NS5 453 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 MED10Q9BTT4 135 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 SRRTQ9BXP5 876 aaKnown RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 GTPBP4Q9BZE4 634 aaKnown RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 IMPG2Q9BZV3 1241 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 NIF3L1Q9GZT8 377 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ABCB6Q9NP58 842 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 KRT82Q9NSB4 513 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 FAM49BQ9NUQ9 324 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 RAB20Q9NX57 234 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 GDE1Q9NZC3 331 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms