RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 C3orf62Q6ZUJ4 267 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 TRPM8Q7Z2W7 1104 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ZNF483Q8TF39 744 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 VPS33BQ9H267 617 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 DHX35Q9H5Z1 703 aaKnown RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 AVENQ9NQS1 362 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 RAB6BQ9NRW1 208 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ERAP1Q9NZ08 941 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 C15orf41Q9Y2V0 281 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 CCT8L1PA6NM43 557 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 A8MXQ7 604 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 B4GALT5O43286 388 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 HBP1O60381 514 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 STK10O94804 968 aaKnown RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 CFHP08603 1231 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 NOMO3P69849 1222 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ROR1Q01973 937 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 TFDP2Q14188 446 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 HSDL1Q3SXM5 330 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SLC39A4Q6P5W5 647 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 WDR49Q8IV35 697 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ATP11CQ8NB49 1132 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 MTMR14Q8NCE2 650 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 SERPINB12Q96P63 405 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 ST6GALNAC4Q9H4F1 302 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.05□□□□□ -0.64
CALD1-203ENST00000393118 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
CALD1-203ENST00000393118 LTBP4Q8N2S1 1624 aa11.05□□□□□ -0.64
CALD1-203ENST00000393118 NFKBIEO00221 500 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 O00370 1275 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 APRTP07741 180 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
CALD1-203ENST00000393118 COG7P83436 770 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TAP1Q03518 808 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 DEUP1Q05D60 604 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 USP4Q13107 963 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 GPR162Q16538 588 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 GPATCH2LQ9NWQ4 482 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 NINJ2Q9NZG7 142 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 FAM47DPA6NHR8 397 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TTC36A6NLP5 189 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 KCNN4O15554 427 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 STAG3L1P0CL83 205 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 LCP1P13796 627 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 SAT1P21673 171 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 SP2Q02086 613 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 FSTL1Q12841 308 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 AUHQ13825 339 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 ANKRD20A8PQ5CZ79 823 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 MYH4Q9Y623 1939 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 CFAP157Q5JU67 520 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 BZW1Q7L1Q6 419 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 ARHGAP22Q7Z5H3 698 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 ANKRD13AQ8IZ07 590 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 PGM2Q96G03 612 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 ETNK1Q9HBU6 452 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 XPO7Q9UIA9 1087 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 RPTORQ8N122 1335 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 INSRRP14616 1297 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 KIZQ2M2Z5 673 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 EEF1DP3Q658K8 133 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TRIM73Q86UV7 250 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 TTC16Q8NEE8 873 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 SNRNP27Q8WVK2 155 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 FHDC1Q9C0D6 1143 aaPredicted RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
CALD1-203ENST00000393118 APOBEC3GQ9HC16 384 aaKnown RBP11.04□□□□□ -0.64
CALD1-203ENST00000393118 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 FSCN2O14926 492 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 BAG2O95816 211 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 PYGLP06737 847 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 RFC1P35251 1148 aaPredicted RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 ARL4AP40617 200 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 PEX5P50542 639 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 ERFP50548 548 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 RPS6KA3P51812 740 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 HIRAP54198 1017 aaPredicted RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 DRG2P55039 364 aaKnown RBP11.03□□□□□ -0.64
CALD1-203ENST00000393118 RCN2Q14257 317 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 MFSD4BQ5TF39 518 aa11.03□□□□□ -0.64
CALD1-203ENST00000393118 TSNARE1Q96NA8 513 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms