RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 KBTBD13C9JR72 458 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 CAPN15O75808 1086 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 RPL9P32969 192 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 LRRC38Q5VT99 294 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 MAATS1Q7Z4T9 603 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 DPEP3Q9H4B8 488 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 RSAD1Q9HA92 442 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 CEP350Q5VT06 3117 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 GOLGA8SH3BPF8 625 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 MAP2K7O14733 419 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 FSCN2O14926 492 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 MYBL2P10244 700 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 SCNN1GP51170 649 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 GUCY2DQ02846 1103 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 CYP1B1Q16678 543 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 DAB2IPQ5VWQ8 1189 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 HDXQ7Z353 690 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC35F5Q8WV83 523 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 TNIP3Q96KP6 325 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 MTUS1Q9ULD2 1270 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 USTQ9Y2C2 406 aa12.08□□□□□ -0.48
SMARCAL1-203ENST00000392128 PODXLO00592 558 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 CYB561D2O14569 222 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 PHF2O75151 1096 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 SASH3O75995 380 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 LMO2P25791 158 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ADAT2Q7Z6V5 191 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 PRELID2Q8N945 189 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 EIF1ADQ8N9N8 165 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 EXD1Q8NHP7 514 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 EPB41L5Q9HCM4 733 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 METTL5Q9NRN9 209 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 AMACRQ9UHK6 382 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 E5RJQ4 531 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 F8VP50 259 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 DNM1LO00429 736 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 GABRDO14764 452 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 INPPL1O15357 1258 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 HCRTO43612 131 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 PDGFRBP09619 1106 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 CHRNA3P32297 505 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 CLCNKBP51801 687 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 BCAT1P54687 386 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 SNX16P57768 344 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 GRIK3Q13003 919 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 DHX34Q14147 1143 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 MBTPS1Q14703 1052 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 TMEM110Q86TL2 294 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ECHDC2Q86YB7 292 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 C12orf50Q8NA57 414 aaPredicted RBP12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 JOSD2Q8TAC2 188 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 MAIP1Q8WWC4 291 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ST7Q9NRC1 585 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 RGS18Q9NS28 235 aa12.07□□□□□ -0.48
SMARCAL1-203ENST00000392128 ZSCAN5CA6NGD5 496 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 PSMA2P25787 234 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 CDK7P50613 346 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 EPHB4P54760 987 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 BST2Q10589 180 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 ACAP1Q15027 740 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 UPP1Q16831 310 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 TMEM86AQ8N2M4 240 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 SEC14L1Q92503 715 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 SENP8Q96LD8 212 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 RUNDC3BQ96NL0 473 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 CYLDQ9NQC7 956 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 PAK6Q9NQU5 681 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 OGFRQ9NZT2 677 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 PCYOX1Q9UHG3 505 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 TSC2P49815 1807 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 RARAP10276 462 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 CCDC130P13994 396 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 PAX3P23760 479 aa12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 SSR1P43307 286 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-203ENST00000392128 RPL34P49207 117 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms