RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 LILRB1Q8NHL6 650 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CPT1CQ8TCG5 803 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CCHCR1Q8TD31 782 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 TNPO1Q92973 898 aaKnown RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CYFIP2Q96F07 1278 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 APOPT1Q96IL0 206 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 USP44Q9H0E7 712 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 ERVMER34-1Q9H9K5 563 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 BRF2Q9HAW0 419 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CYP4F11Q9HBI6 524 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 C1GALT1Q9NS00 363 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 TBK1Q9UHD2 729 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 EIF2B4Q9UI10 523 aaKnown RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 MID2Q9UJV3 735 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 HSF4Q9ULV5 492 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 DAPP1Q9UN19 280 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CAMK2AQ9UQM7 478 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 NAALADL1Q9UQQ1 740 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 DNAJC16Q9Y2G8 782 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 MYBBP1AQ9BQG0 1328 aaKnown RBP7.02□□□□□ -1.28
TRAV35-201ENST00000390462 KIF27Q86VH2 1401 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 YEATS2Q9ULM3 1422 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 TMEM233B4DJY2 109 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 CHGBP05060 677 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 HOXB4P17483 251 aaPredicted RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 ECHS1P30084 290 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 PGM1P36871 562 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 PAFAH1B1P43034 410 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 MCM2P49736 904 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 ALDH18A1P54886 795 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 MRPS35P82673 323 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 GRIN1Q05586 938 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 COG2Q14746 738 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 PRAMEF14Q5SWL7 426 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 TRAPPC3LQ5T215 181 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 FAM69AQ5T7M9 428 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 NAA35Q5VZE5 725 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 ALKBH5Q6P6C2 394 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 CRTC1Q6UUV9 634 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 LRRC8DQ7L1W4 858 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 MCM10Q7L590 875 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 ZFPM1Q8IX07 1006 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 GALNT4Q8N4A0 578 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 CALML6Q8TD86 181 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 JAKMIP2Q96AA8 810 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 C3orf49Q96BT1 292 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 FCRL2Q96LA5 508 aaPredicted RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 HEXIM2Q96MH2 286 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
TRAV35-201ENST00000390462 DEF6Q9H4E7 631 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 USP40Q9NVE5 1235 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 BLOC1S6Q9UL45 172 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 CA14Q9ULX7 337 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 RABL2BQ9UNT1 228 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 PCDHB4Q9Y5E5 795 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 LYVE1Q9Y5Y7 322 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 FANCAO15360 1455 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 IQSEC2Q5JU85 1478 aa7.02□□□□□ -1.29
TRAV35-201ENST00000390462 NEO1Q92859 1461 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 CARMIL1Q5VZK9 1371 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 PCDH17O14917 1159 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 SART1O43290 800 aaKnown RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 PHF2O75151 1096 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 RASSF9O75901 435 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 MATN4O95460 622 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 MPIG6BO95866 241 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 SLC4A1P02730 911 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 AMY1AP04745 511 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 ATP5BP06576 529 aaKnown RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 SRGAP2BP0DMP2 458 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 PECAM1P16284 738 aaPredicted RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 CD86P42081 329 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 PIK3CGP48736 1102 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 ALDH3A2P51648 485 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 RPP30P78346 268 aaKnown RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 DBPQ10586 325 aaPredicted RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 TBCCQ15814 346 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 KYNUQ16719 465 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 C5orf22Q49AR2 442 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 PARP10Q53GL7 1025 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 DCAF12L1Q5VU92 463 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 TRIM68Q6AZZ1 485 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 UNC5DQ6UXZ4 953 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 Q6ZVL8 140 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 GALNT7Q86SF2 657 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 TTC30AQ86WT1 665 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 CCDC28AQ8IWP9 274 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 SP8Q8IXZ3 490 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 FMR1NBQ8N0W7 255 aaPredicted RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 C17orf53Q8N3J3 647 aaPredicted RBP7.01□□□□□ -1.29
TRAV35-201ENST00000390462 MPP5Q8N3R9 675 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 TRIML1Q8N9V2 468 aa7.01□□□□□ -1.29
TRAV35-201ENST00000390462 GDAP1Q8TB36 358 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms