RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 FOCADQ5VW36 1801 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 C15orf38-AP3S2A0A0A6YYH1 394 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 SGPL1O95470 568 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 CLPTM1O96005 669 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NFIL3Q16649 462 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 DNAL1Q4LDG9 190 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 FBXL19Q6PCT2 694 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 HHIPL2Q6UWX4 724 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 ARPINQ7Z6K5 226 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 NUP93Q8N1F7 819 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 FNDC8Q8TC99 324 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 PYDC1Q8WXC3 89 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 FAM118BQ9BPY3 351 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
VPS9D1-201ENST00000389386 FAM237BA0A1B0GVD1 139 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 NDC80O14777 642 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 E2F6O75461 281 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 PCSK6P29122 969 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 NCOA4Q13772 614 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 CCNG2Q16589 344 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 USH1GQ495M9 461 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 DACT2Q5SW24 774 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 BANPQ8N9N5 519 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 NLGN2Q8NFZ4 835 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 CEP70Q8NHQ1 597 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 GDPD5Q8WTR4 605 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 CCDC160A6NGH7 325 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 SPECC1L-ADORA2AF8WAN1 911 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 STK10O94804 968 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 ZFXP17010 805 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 PEX2P28328 305 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 JAG1P78504 1218 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 ARHGAP4P98171 946 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 KLF1Q13351 362 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 COG2Q14746 738 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 EFHC2Q5JST6 749 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 ARHGEF19Q8IW93 802 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 HSPBAP1Q96EW2 488 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 HEMGNQ9BXL5 484 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 FAIMQ9NVQ4 179 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 SUN2Q9UH99 717 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 TAGLN3Q9UI15 199 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 NOCTQ9UK39 431 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 POLIQ9UNA4 740 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 SSX2IPQ9Y2D8 614 aa15.36■□□□□ 0.05
VPS9D1-201ENST00000389386 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 BOLA2-SMG1P6H3BVE0 249 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 ALOX15BO15296 676 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC1A1P43005 524 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 HIRAP54198 1017 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 OXCT1P55809 520 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 FOLH1Q04609 750 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 KDSRQ06136 332 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 PDIA2Q13087 525 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 MYLK3Q32MK0 819 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 HSF5Q4G112 596 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 SHKBP1Q8TBC3 707 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 EPS8L1Q8TE68 723 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 GFM2Q969S9 779 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 CORO1BQ9BR76 489 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 ZNF711Q9Y462 761 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 A0A088AWK7 358 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 TXNDC9O14530 226 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 SPATA31C1P0DKV0 1188 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 LRRC8BQ6P9F7 803 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 CHSY1Q86X52 802 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 MZB1Q8WU39 189 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 ZDHHC15Q96MV8 337 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 BTBD9Q96Q07 612 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 DMTF1Q9Y222 760 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 TDRKHQ9Y2W6 561 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 SMCHD1A6NHR9 2005 aa15.35■□□□□ 0.05
VPS9D1-201ENST00000389386 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 GOLGA8RI6L899 631 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 IL1BP01584 269 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 DHRS4L1P0CG22 281 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 YY1P25490 414 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 SLC5A2P31639 672 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 PTGER2P43116 358 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 PDE1BQ01064 536 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 MDH1BQ5I0G3 518 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 DMAC2Q9NW81 257 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 SCAF8Q9UPN6 1271 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 MYH11P35749 1972 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 ATRNL1Q5VV63 1379 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 E9PBE3 544 aa15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 DNALI1O14645 258 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-201ENST00000389386 TBCAO75347 108 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms