RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 SPSB4Q96A44 273 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 FKBP10Q96AY3 582 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 NMD3Q96D46 503 aaKnown RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 CHFRQ96EP1 664 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PPP1R9BQ96SB3 815 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 STRBPQ96SI9 672 aaKnown RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 SARGQ9BW04 601 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PNPLA8Q9NP80 782 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 DDX21Q9NR30 783 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 TRMT13Q9NUP7 481 aaKnown RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 MRPS18AQ9NVS2 196 aaKnown RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 SYBUQ9NX95 663 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 VSX1Q9NZR4 365 aaPredicted RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 CPNE7Q9UBL6 633 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 ING1Q9UK53 422 aaPredicted RBP4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 HDAC9Q9UKV0 1011 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 FAM50BQ9Y247 325 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 PCDHGB6Q9Y5F9 930 aa4.06□□□□□ -1.76
RNU6-39P-201ENST00000384344 USP19O94966 1318 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 TRIM43BA6NCK2 446 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 RHPN2P1A8MT19 583 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 URI1O94763 535 aaPredicted RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 CHRM2P08172 466 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 TRIM27P14373 513 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 PHKG2P15735 406 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZNF134P52741 427 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 FMO1Q01740 532 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 IFIT5Q13325 482 aaKnown RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 PLA1AQ53H76 456 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 ARHGAP40Q5TG30 622 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 RGS7BPQ6MZT1 257 aaPredicted RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 GAS2L3Q86XJ1 694 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLC15A3Q8IY34 581 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 YAF2Q8IY57 180 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 SPARTQ8N0X7 666 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 KRT78Q8N1N4 520 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 SDR16C5Q8N3Y7 309 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 CAGE1Q8TC20 777 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 RAPGEF4Q8WZA2 1011 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 UNKQ9C0B0 810 aaKnown RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 SERHLQ9NQF3 203 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 KLC4Q9NSK0 619 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 EPN1Q9Y6I3 576 aaPredicted RBP4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 COL4A3Q01955 1670 aa4.05□□□□□ -1.76
RNU6-39P-201ENST00000384344 LOC102723971A0A1B0GUV8 181 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 PYCARD-AS1I3L0S3 204 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 DCLK1O15075 740 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLC16A3O15427 465 aaKnown RBP4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLPIP03973 132 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 PRKAR1BP31321 381 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 MPLP40238 635 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 TOB1P50616 345 aaPredicted RBP4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 PDE6CP51160 858 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 TBX4P57082 545 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 PICALMQ13492 652 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 BOP1Q14137 746 aaKnown RBP4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 TBCCQ15814 346 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 FAM153CQ494X1 144 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZNF618Q5T7W0 954 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 VPS53Q5VIR6 699 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 DCAF12L1Q5VU92 463 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 NOL8Q76FK4 1167 aaKnown RBP4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 GRASPQ7Z6J2 395 aaPredicted RBP4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 PBKQ96KB5 322 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 MSLNLQ96KJ4 702 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 MESP1Q9BRJ9 268 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 DUSP26Q9BV47 211 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 STK31Q9BXU1 1019 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 AMBRA1Q9C0C7 1298 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZCWPW1Q9H0M4 648 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 SMURF2Q9HAU4 748 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 GLOD4Q9HC38 313 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 EHD3Q9NZN3 535 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 SERTAD3Q9UJW9 196 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 DMRT1Q9Y5R6 373 aa4.04□□□□□ -1.76
RNU6-39P-201ENST00000384344 ANO9A1A5B4 782 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 GCOM1H8Y6P7 765 aaPredicted RBP4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 CCP110O43303 1012 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 THAP12O43422 761 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 RGS10O43665 173 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 TTLL1O95922 423 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 ONECUT2O95948 504 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 KRT4P19013 534 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 GRIA3P42263 894 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 ALDH9A1P49189 494 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 MTHFSP49914 203 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 MYO1EQ12965 1108 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 BMPR2Q13873 1038 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 GALEQ14376 348 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 SLC29A2Q14542 456 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 ZNF169Q14929 603 aaPredicted RBP4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 C3orf38Q5JPI3 329 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 STRIP1Q5VSL9 837 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 CACHD1Q5VU97 1274 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 Q6ZPA2 131 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 TSHZ1Q6ZSZ6 1077 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 DTX2Q86UW9 622 aa4.03□□□□□ -1.76
RNU6-39P-201ENST00000384344 COL23A1Q86Y22 540 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms