RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SSX2IPQ9Y2D8 614 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SIK3Q9Y2K2 1263 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 FRMPD4Q14CM0 1322 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 PHF2O75151 1096 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SEPT6Q14141 434 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 CCDC14Q49A88 953 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 APPL2Q8NEU8 664 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 AFG3L2Q9Y4W6 797 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 TRIM17Q9Y577 477 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SPDYE5A6NIY4 337 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 KBTBD13C9JR72 458 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 YBX3P16989 372 aaKnown RBP eCLIP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 GLRA2P23416 452 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 HOXA7P31268 230 aaPredicted RBP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 TNFSF9P41273 254 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 RASSF3Q86WH2 238 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SLC25A41Q8N5S1 370 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 ZNF214Q9UL59 606 aaPredicted RBP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SNED1Q8TER0 1413 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 CYP3A7-CYP3A51PA0A087WV96 503 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 RRM1P23921 792 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 CYP3A7P24462 503 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 CUL2Q13617 745 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 FIGNQ5HY92 759 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 SH2D4BQ5SQS7 431 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 TADA2AO75478 443 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 CALB1P05937 261 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ATP6V1B1P15313 513 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 RPL21P46778 160 aaKnown RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 RNF217Q8TC41 542 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 DPP3Q9NY33 737 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 FIS1Q9Y3D6 152 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 PQBP1O60828 265 aaKnown RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 CDH16O75309 829 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ATXN8OSP0DMR3 200 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ANXA13P27216 316 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 TSPY1Q01534 308 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 MPZL3Q6UWV2 235 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 PPP1R36Q96LQ0 422 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 STRCP1A6NGW2 1772 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 FAM47DPA6NHR8 397 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 H3BRJ5 948 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ZNF862O60290 1169 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ALDH18A1P54886 795 aaKnown RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 FSTL1Q12841 308 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 LRRC55Q6ZSA7 311 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 YTHDF3Q7Z739 585 aaKnown RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 MTDHQ86UE4 582 aaKnown RBP19.73■□□□□ 0.75
CSPG5-202ENST00000383738 KATNAL1Q9BW62 490 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 C17orf75Q9HAS0 396 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 PHTF1Q9UMS5 762 aa19.73■□□□□ 0.75
CSPG5-202ENST00000383738 ADRB2P07550 413 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 CYP11B1P15538 503 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 P3H1Q32P28 736 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 RGMBQ6NW40 437 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 RNF180Q86T96 592 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 CENPKQ9BS16 269 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 NDE1Q9NXR1 346 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 TRAF3IP3Q9Y228 551 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 ADCY3O60266 1144 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 MRPS35P82673 323 aaKnown RBP19.72■□□□□ 0.75
CSPG5-202ENST00000383738 THEM5Q8N1Q8 247 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 NT5C1AQ9BXI3 368 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 TXNRD2Q9NNW7 524 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 PABPN1LA6NDY0 278 aaKnown RBP19.72■□□□□ 0.75
CSPG5-202ENST00000383738 B2RBV5 119 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 GRIK1P39086 918 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 EEF1DP3Q658K8 133 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 LVRNQ6Q4G3 990 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 PPM1NQ8N819 430 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 KRT35Q92764 455 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 XPNPEP3Q9NQH7 507 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 WRAP73Q9P2S5 460 aaPredicted RBP19.72■□□□□ 0.75
CSPG5-202ENST00000383738 ANGPTL2Q9UKU9 493 aa19.72■□□□□ 0.75
CSPG5-202ENST00000383738 LOC100653049A0A140TA62 436 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 MANSC4A6NHS7 340 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 KRT34O76011 436 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 CELF3Q5SZQ8 465 aaKnown RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 ENOSF1Q7L5Y1 443 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 ZSWIM2Q8NEG5 633 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 SNF8Q96H20 258 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 INPP4AQ96PE3 977 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 NR2E1Q9Y466 385 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 MMP14P50281 582 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 ERMARDQ5T6L9 678 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 CISHQ9NSE2 258 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 IGLV3-22A0A075B6J6 115 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 RRN3P2A6NIE6 340 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 TGFB1I1O43294 461 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 HSD17B4P51659 736 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 CDK17Q00537 523 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 PDCD6IPQ8WUM4 868 aaKnown RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 PPWD1Q96BP3 646 aaKnown RBP19.71■□□□□ 0.75
CSPG5-202ENST00000383738 AGAP3Q96P47 875 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 RNPEPQ9H4A4 650 aa19.71■□□□□ 0.75
CSPG5-202ENST00000383738 SLCO1B3Q9NPD5 702 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms