RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 SPOCD1Q6ZMY3 1216 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 ZNF771Q7L3S4 317 aaPredicted RBP17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 ZDHHC17Q8IUH5 632 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 FBXO25Q8TCJ0 367 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 C1orf54Q8WWF1 131 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 ARL8AQ96BM9 186 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 LENG1Q96BZ8 264 aaPredicted RBP17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 TMEM109Q9BVC6 243 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 FOXP3Q9BZS1 431 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRIM31Q9BZY9 425 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 PABPC3Q9H361 631 aaKnown RBP17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 SYNCQ9H7C4 482 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 CHST7Q9NS84 486 aa17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
LOH12CR2-201ENST00000381800 hCG_1818297A0A087WSY0 165 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SMIM28A0A1B0GU29 152 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 RARGP13631 454 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 IVDP26440 423 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 GYS2P54840 703 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 BEX3Q00994 111 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 KRT17Q04695 432 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 CALCOCO2Q13137 446 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 RHBDF2Q6PJF5 856 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 CEP128Q6ZU80 1094 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 DPH6Q7L8W6 267 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SESTD1Q86VW0 696 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 CRYBG2Q8N1P7 616 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 CCDC89Q8N998 374 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SNF8Q96H20 258 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SLC4A5Q9BY07 1137 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 NXF3Q9H4D5 531 aaKnown RBP17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 CHST12Q9NRB3 414 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 GTF2IRD1Q9UHL9 959 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 TSPAN16Q9UKR8 245 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 GINS2Q9Y248 185 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 SCN1AP35498 2009 aa17.05■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRIP12Q14669 1992 aaPredicted RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 DPYSL4O14531 572 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 LRCH4O75427 683 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 ECM2O94769 699 aaPredicted RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 MYZAPP0CAP1 466 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 LRPAP1P30533 357 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 CDKN2BP42772 138 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 SSR1P43307 286 aaKnown RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 KCNJ1P48048 391 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 RPL34P49207 117 aaKnown RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 ZNF143P52747 638 aaPredicted RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 PMS2P54278 862 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 MRPS6P82932 125 aaKnown RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 FBXO47Q5MNV8 452 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 MFSD7Q6UXD7 560 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 ARCQ7LC44 396 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 JOSD2Q8TAC2 188 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 SPC25Q9HBM1 224 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 ASNSD1Q9NWL6 643 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 TUBGCP4Q9UGJ1 667 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
LOH12CR2-201ENST00000381800 KRT14P02533 472 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 PFKMP08237 780 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 CTGFP29279 349 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 SV2CQ496J9 727 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 CEP85LQ5SZL2 805 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRMT10CQ7L0Y3 403 aaKnown RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 TMEM110Q86TL2 294 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 VSIG1Q86XK7 387 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 TTC13Q8NBP0 860 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 CMASQ8NFW8 434 aaPredicted RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 UBLCP1Q8WVY7 318 aaPredicted RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 MRPL45Q9BRJ2 306 aaKnown RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 EPB41L4BQ9H329 900 aa17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 METTL5Q9NRN9 209 aaKnown RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 R3HDM2Q9Y2K5 976 aaKnown RBP17.03■□□□□ 0.32
LOH12CR2-201ENST00000381800 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 SRRM3A6NNA2 597 aaPredicted RBP17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 GOLGA8SH3BPF8 625 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 M0QZ92 97 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 SEPT4O43236 478 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 LIASO43766 372 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 LMAN1P49257 510 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 TAF6P49848 677 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 ZNF200P98182 395 aaPredicted RBP17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 ODF2Q5BJF6 829 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 RELL1Q8IUW5 271 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 TMEM130Q8N3G9 435 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 ARFGAP2Q8N6H7 521 aa17.02■□□□□ 0.32
LOH12CR2-201ENST00000381800 TOP6BLQ8N6T0 577 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms