RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RSPRY1Q96DX4 576 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 TRMT2BQ96GJ1 504 aaKnown RBP13.93□□□□□ -0.18
RPAIN-202ENST00000381208 HPDLQ96IR7 371 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 SLC46A2Q9BY10 475 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 FGFBP2Q9BYJ0 223 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 ZNF292O60281 2723 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 TSC2P49815 1807 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 NCANO14594 1321 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 PVALEFA0A1B0GWK0 134 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 SPECC1L-ADORA2AF8WAN1 911 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 NOL4O94818 638 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-202ENST00000381208 SDHBP21912 280 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 MAGEA11P43364 429 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 PDE6CP51160 858 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 WNT7BP56706 349 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 CYP4F8P98187 520 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 ITPRIPL2Q3MIP1 535 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 VSTM1Q6UX27 236 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-202ENST00000381208 LIMS2Q7Z4I7 341 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 FSIP1Q8NA03 581 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 ZSWIM2Q8NEG5 633 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 GOLGA5Q8TBA6 731 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 PI4K2AQ9BTU6 479 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 TDP1Q9NUW8 608 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 NCDNQ9UBB6 729 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 SIX4Q9UIU6 781 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 CDH9Q9ULB4 789 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 RAB23Q9ULC3 237 aa13.92□□□□□ -0.18
RPAIN-202ENST00000381208 SLC38A8A6NNN8 435 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 POLR2DO15514 142 aaKnown RBP13.91□□□□□ -0.18
RPAIN-202ENST00000381208 PRAMEF12O95522 483 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 F13A1P00488 732 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 PFKLP17858 780 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 CNR2P34972 360 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 ME1P48163 572 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
RPAIN-202ENST00000381208 SOWAHAQ2M3V2 549 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 CC2D1AQ6P1N0 951 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-202ENST00000381208 FAM171BQ6P995 826 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 CBWD2Q8IUF1 395 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 XXYLT1Q8NBI6 393 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 AGPAT3Q9NRZ7 376 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 TMLHEQ9NVH6 421 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
RPAIN-202ENST00000381208 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
RPAIN-202ENST00000381208 TCHHQ07283 1943 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 TNNI1P19237 187 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 WARSP23381 471 aaKnown RBP13.9□□□□□ -0.18
RPAIN-202ENST00000381208 HOXA6P31267 233 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 EHHADHQ08426 723 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 PSMD6Q15008 389 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 PDGFRLQ15198 375 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 DDR2Q16832 855 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 BMT2Q1RMZ1 405 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 TMEM150AQ86TG1 271 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 C12orf56Q8IXR9 622 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 CEP57L1Q8IYX8 460 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 MAB21L3Q8N8X9 362 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 OR5B17Q8NGF7 314 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 SPATA17Q96L03 361 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 LRRC3BQ96PB8 259 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 FAM83CQ9BQN1 747 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 SYT15Q9BQS2 421 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 GTSE1Q9NYZ3 720 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 MAGEC2Q9UBF1 373 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-202ENST00000381208 GMEB2Q9UKD1 530 aa13.9□□□□□ -0.18
RPAIN-202ENST00000381208 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-202ENST00000381208 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 NUP210Q8TEM1 1887 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-202ENST00000381208 TRAV19A0A0A6YYK7 116 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 TACC1O75410 805 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 STAU1O95793 577 aaKnown RBP13.89□□□□□ -0.19
RPAIN-202ENST00000381208 DLATP10515 647 aaKnown RBP13.89□□□□□ -0.19
RPAIN-202ENST00000381208 TDGF1P13385 188 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 ACAT1P24752 427 aaKnown RBP13.89□□□□□ -0.19
RPAIN-202ENST00000381208 CYP2F1P24903 491 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 ATICP31939 592 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 HOXD13P35453 343 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 PPP3CCP48454 512 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 AP3M2P53677 418 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 FAM160A1Q05DH4 1040 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 RUNX3Q13761 415 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 TSSK4Q6SA08 328 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 OSTM1Q86WC4 334 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 SCN4BQ8IWT1 228 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
RPAIN-202ENST00000381208 GLIS3Q8NEA6 775 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms