RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TMEM191CA6NGB0 347 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 DCDC2CA8MYV0 355 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 FSCN2O14926 492 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 MYL3P08590 195 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 HSD17B3P37058 310 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 ZNF252P-AS1Q0IIN9 211 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
CLCN4-201ENST00000380829 KYAT1Q16773 422 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 SGO2Q562F6 1265 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 DCUN1D2Q6PH85 259 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 DPH6Q7L8W6 267 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 RHOT1Q8IXI2 618 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 SPDYE1Q8NFV5 336 aaPredicted RBP15.04■□□□□ -0
CLCN4-201ENST00000380829 DNAJB3Q8WWF6 145 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 ATG4AQ8WYN0 398 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 CCT6BQ92526 530 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 SH3GL3Q99963 347 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 ZNF518BQ9C0D4 1074 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 TCRBV5S1A1TA0A578 114 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 GOLGA6L10A6NI86 522 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 CDH5P33151 784 aaPredicted RBP15.04■□□□□ -0
CLCN4-201ENST00000380829 GRM5P41594 1212 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 OGDHQ02218 1023 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 ATP13A4Q4VNC1 1196 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 C17orf99Q6UX52 265 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 SAPCD2Q86UD0 394 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 IFNL1Q8IU54 200 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 RAPGEF5Q92565 580 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 ZNF570Q96NI8 536 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 CHST7Q9NS84 486 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 IP6K2Q9UHH9 426 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 C15orf41Q9Y2V0 281 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 C2CD2Q9Y426 696 aa15.04■□□□□ -0
CLCN4-201ENST00000380829 F8VP50 259 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 GOLGA8SH3BPF8 625 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 PSTPIP1O43586 416 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 CILPO75339 1184 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ANP32DO95626 131 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 RALAP11233 206 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ATICP31939 592 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 RPL21P46778 160 aaKnown RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 PLTPP55058 493 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 PTPN11Q06124 597 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 DHX9Q08211 1270 aaKnown RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ANKS1BQ7Z6G8 1248 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 UBLCP1Q8WVY7 318 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 USP6NLQ92738 828 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 LRRC45Q96CN5 670 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 FMO2Q99518 471 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 YIPF3Q9GZM5 350 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 EBF2Q9HAK2 575 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.03■□□□□ -0
CLCN4-201ENST00000380829 ITGA11Q9UKX5 1188 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 CITO14578 2027 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 MBLAC1A4D2B0 266 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 TREHO43280 583 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 MED7O43513 233 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 DNAJC8O75937 253 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 UPP2O95045 317 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 PAEPP09466 180 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 PSEN2P49810 448 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 DCAF4L1Q3SXM0 396 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 LACTB2Q53H82 288 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 ODF2Q5BJF6 829 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 GLRA4Q5JXX5 417 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ZFYVE27Q5T4F4 411 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 RGMBQ6NW40 437 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 SLC27A1Q6PCB7 646 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 C12orf50Q8NA57 414 aaPredicted RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 TMEM40Q8WWA1 233 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 TMEM176AQ96HP8 235 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 FAM118BQ9BPY3 351 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 APOL6Q9BWW8 343 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 VRTNQ9H8Y1 702 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 ZDHHC18Q9NUE0 388 aa15.03■□□□□ -0
CLCN4-201ENST00000380829 R3HDM2Q9Y2K5 976 aaKnown RBP15.03■□□□□ -0
CLCN4-201ENST00000380829 SMIM35A0A1B0GVV1 85 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 PI4K2BG5E9Z4 385 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 PPEF2O14830 753 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 MYZAPP0CAP1 466 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 P4HA1P13674 534 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 RBP5P82980 135 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 THEMIS2Q5TEJ8 643 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 CAPRIN2Q6IMN6 1127 aaKnown RBP15.02■□□□□ -0
CLCN4-201ENST00000380829 FBXO25Q8TCJ0 367 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 RNF25Q96BH1 459 aaPredicted RBP15.02■□□□□ -0
CLCN4-201ENST00000380829 HEXIM2Q96MH2 286 aaKnown RBP15.02■□□□□ -0
CLCN4-201ENST00000380829 CPXM1Q96SM3 734 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 NXF3Q9H4D5 531 aaKnown RBP15.02■□□□□ -0
CLCN4-201ENST00000380829 LRRC19Q9H756 370 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 GRHL1Q9NZI5 618 aa15.02■□□□□ -0
CLCN4-201ENST00000380829 PODXLO00592 558 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 TNPO2O14787 897 aaKnown RBP15.02□□□□□ -0.01
CLCN4-201ENST00000380829 DARSP14868 501 aaKnown RBP15.02□□□□□ -0.01
CLCN4-201ENST00000380829 MAN1A1P33908 653 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 RGS2P41220 211 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 TRIP11Q15643 1979 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms