RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 PPP1R2P3Q6NXS1 205 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 MTHFD1LQ6UB35 978 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 TRMT10CQ7L0Y3 403 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 MICAL1Q8TDZ2 1067 aa8.4□□□□□ -1.06
PDLIM5-204ENST00000380176 hCG_1818297A0A087WSY0 165 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 LRRD1A4D1F6 860 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 C3orf70A6NLC5 250 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 H3BRB1 525 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 CILPO75339 1184 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 MCF2P10911 925 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 CREB1P16220 341 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 CDKN2BP42772 138 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 MMP13P45452 471 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 YWHAEP62258 255 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM62Q0P6H9 643 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 PIGHQ14442 188 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 P3H1Q32P28 736 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 IZUMO3Q5VZ72 239 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF365Q70YC5 407 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 DPH6Q7L8W6 267 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 GSTA5Q7RTV2 222 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 RBM41Q96IZ5 413 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 SELENOSQ9BQE4 189 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM109Q9BVC6 243 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM129AQ9BZQ8 928 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 C10orf88Q9H8K7 445 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 ZWILCHQ9H900 591 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 HOMER3Q9NSC5 361 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 CEP83Q9Y592 693 aa8.4□□□□□ -1.07
PDLIM5-204ENST00000380176 BRCA2P51587 3418 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 SIGLEC16A6NMB1 481 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PIK3R2O00459 728 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TSPAN1O60635 241 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 LRCH4O75427 683 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 MICAL2O94851 1124 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TTC4O95801 387 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PAEPP09466 180 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 KRT3P12035 628 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 SMPD1P17405 629 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PSMA2P25787 234 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 SERPINB4P48594 390 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PSMC1P62191 440 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 SLC25A11Q02978 314 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PTPN11Q06124 597 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 XYLT1Q86Y38 959 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 NIPA2Q8N8Q9 360 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 UBA3Q8TBC4 463 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 STK32AQ8WU08 396 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 BRI3BPQ8WY22 251 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 LHX5Q9H2C1 402 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 VTA1Q9NP79 307 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 METTL5Q9NRN9 209 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 AGAP1Q9UPQ3 857 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CCL15-CCL14A0A0B4J2E2 113 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 MAGEB2O15479 319 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 GPR37L1O60883 481 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 RECKO95980 971 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 AGTP01019 485 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CD48P09326 243 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CETPP11597 493 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CYP3A5P20815 502 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TAF5Q15542 800 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CCL15Q16663 113 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 RAB6CQ53S08 254 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TFDP3Q5H9I0 405 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 LRRC38Q5VT99 294 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 EXOC3L1Q86VI1 746 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 CCDC89Q8N998 374 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM176AQ96HP8 235 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 HPDLQ96IR7 371 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 C9orf72Q96LT7 481 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 XPO6Q96QU8 1125 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TMEM121Q9BTD3 319 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 RAB6CQ9H0N0 254 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 ZNF148Q9UQR1 794 aa8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TRIP12Q14669 1992 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-204ENST00000380176 TJP3O95049 919 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 DYNLT1P63172 113 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 CCNA1P78396 465 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 GRIK4Q16099 956 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 KIZQ2M2Z5 673 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 FAM182AQ5T1J6 154 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 HIBCHQ6NVY1 386 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 GPR142Q7Z601 462 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 C12orf29Q8N999 325 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 ATXN2LQ8WWM7 1075 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 PIWIL1Q96J94 861 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 PCSK1NQ9UHG2 260 aa8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 DDX20Q9UHI6 824 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-204ENST00000380176 GINS2Q9Y248 185 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms