RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CYP1A2P05177 515 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 HSD17B3P37058 310 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 USP4Q13107 963 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 PDCLQ13371 301 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 PAN2Q504Q3 1202 aaKnown RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 ENOSF1Q7L5Y1 443 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 ACOT1Q86TX2 421 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 DRAXINQ8NBI3 349 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 HSPH1Q92598 858 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 PRMT7Q9NVM4 692 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 GOLGA8MH3BSY2 632 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 STRNO43815 780 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 FAM189A1O60320 539 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 PIAS1O75925 651 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 KRT1P04264 644 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 KRT71Q3SY84 523 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 ANKS1BQ7Z6G8 1248 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 FAXDC2Q96IV6 333 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 NAP1L3Q99457 506 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 VTA1Q9NP79 307 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 COMMD8Q9NX08 183 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 TUBGCP4Q9UGJ1 667 aa11.39□□□□□ -0.59
NEDD9-201ENST00000379433 MRPL42Q9Y6G3 142 aaKnown RBP11.39□□□□□ -0.59
NEDD9-201ENST00000379433 MTA2O94776 668 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ADCY8P40145 1251 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 PEX5P50542 639 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TMEM35BQ8NCS4 154 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TMEM40Q8WWA1 233 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 PHACTR1Q9C0D0 580 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 WNT8AQ9H1J5 351 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 UVRAGQ9P2Y5 699 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 IGKV6-21A0A0C4DH24 114 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 MIF4GDA9UHW6 222 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CCDC188H7C350 402 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 RARBP10826 455 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ETS1P14921 441 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 PSMA2P25787 234 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ASPAP45381 313 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 RPL21P46778 160 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 NRLP54845 237 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 HIC1Q14526 733 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CCDC38Q502W7 563 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 MARCH8Q5T0T0 291 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 SH3PXD2AQ5TCZ1 1133 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 MON1BQ7L1V2 547 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 NETO2Q8NC67 525 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 JOSD2Q8TAC2 188 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CALN1Q9BXU9 219 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 PABPN1LA6NDY0 278 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 F5H423 210 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 MEFVO15553 781 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TSPAN1O60635 241 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 IGFBP6P24592 240 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ADORA2BP29275 332 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 NDST1P52848 882 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 GUCY1A3Q02108 690 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 OGDHQ02218 1023 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 KRT17Q04695 432 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TAF5Q15542 800 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF484Q5JVG2 852 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CDCA2Q69YH5 1023 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 OR6B2Q6IFH4 312 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 LEKR1Q6ZMV7 388 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CPXM1Q96SM3 734 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ERP44Q9BS26 406 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
NEDD9-201ENST00000379433 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 ZNF148Q9UQR1 794 aa11.38□□□□□ -0.59
NEDD9-201ENST00000379433 MYADML2A6NDP7 307 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 DCDC2CA8MYV0 355 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ABLIM1O14639 778 aa11.37□□□□□ -0.59
NEDD9-201ENST00000379433 ZC3H11AO75152 810 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEDD9-201ENST00000379433 PIGRP01833 764 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms