RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 NAPEPLDQ6IQ20 393 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 FAR2Q96K12 515 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 MAGEA13PA6NCF6 341 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 SOAT2O75908 522 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 GYS1P13807 737 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 GUCY1A2P33402 732 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 RBBP8NLQ8NC74 664 aaPredicted RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 TMEM143Q96AN5 459 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 A2ML1A8K2U0 1454 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 LAYNQ6UX15 382 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 FAM71DQ8N9W8 422 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 LPAR1Q92633 364 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 SYN2Q92777 582 aaPredicted RBP11.65□□□□□ -0.54
RAD50-201ENST00000378823 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
RAD50-201ENST00000378823 KIF28PB7ZC32 967 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 MAGEB2O15479 319 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 GYPCP04921 128 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 RRM2P31350 389 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 ANXA11P50995 505 aaKnown RBP11.65□□□□□ -0.55
RAD50-201ENST00000378823 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.553e-6■■■■□ 22.6
RAD50-201ENST00000378823 TTLL9Q3SXZ7 439 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 ZNF333Q96JL9 665 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 METP08581 1390 aa11.65□□□□□ -0.55
RAD50-201ENST00000378823 E7ENQ6 273 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 CST8O60676 142 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CCZ1BP86790 482 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 BTKQ06187 659 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ANKS1AQ92625 1134 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CDHR2Q9BYE9 1310 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 C2orf81A6NN90 581 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CHRM3P20309 590 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 SERPINB5P36952 375 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 HSD17B3P37058 310 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
RAD50-201ENST00000378823 PHKG1Q16816 387 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CYP51A1Q16850 503 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 SUGP1Q8IWZ8 645 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 OR2W6PQ8NHA6 318 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 FEZF2Q8TBJ5 459 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 NOD2Q9HC29 1040 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 KCNH4Q9UQ05 1017 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 KANSL1LA0AUZ9 987 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 KRT34O76011 436 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CORO7P57737 925 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 OTOAQ7RTW8 1153 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ALDH1A2O94788 518 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 TXNP10599 105 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 CRYMQ14894 314 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ADRM1Q16186 407 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 C19orf18Q8NEA5 215 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 SH3GL1Q99961 368 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 EFCAB1Q9HAE3 211 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 RHBDL2Q9NX52 303 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 SH3BP1Q9Y3L3 701 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ALG6Q9Y672 507 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 RBP3P10745 1247 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 CNTN1Q12860 1018 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 HIST2H2ACQ16777 129 aaPredicted RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 EFHC1Q5JVL4 640 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 HIST2H2AA3Q6FI13 130 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 C11orf96Q7Z7L8 435 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ARID3BQ8IVW6 561 aaPredicted RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 ZC3H13Q5T200 1668 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 ANXA9O76027 345 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 HPDLQ96IR7 371 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 DCLRE1BQ9H816 532 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 TRMT6Q9UJA5 497 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 PDS5AQ29RF7 1337 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 TRIM13O60858 407 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 GPD1P21695 349 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 MUTP22033 750 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 FDFT1P37268 417 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 MMRN1Q13201 1228 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
RAD50-201ENST00000378823 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 MAGEB18Q96M61 343 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 KLHL4Q9C0H6 718 aa11.64□□□□□ -0.55
RAD50-201ENST00000378823 EXTL3O43909 919 aa11.63□□□□□ -0.55
RAD50-201ENST00000378823 CHI3L1P36222 383 aaPredicted RBP11.63□□□□□ -0.55
RAD50-201ENST00000378823 MTM1Q13496 603 aa11.63□□□□□ -0.55
RAD50-201ENST00000378823 GPAT2Q6NUI2 795 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms