RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 STIP1P31948 543 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 GPX6P59796 221 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CLDN10P78369 228 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 GPSM2P81274 684 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 PIGHQ14442 188 aaPredicted RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 TFDP3Q5H9I0 405 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 TATDN1Q6P1N9 297 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 HAUS6Q7Z4H7 955 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 DHDDSQ86SQ9 333 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 MAP4K3Q8IVH8 894 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 ULK2Q8IYT8 1036 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 PDIK1LQ8N165 341 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 PHC3Q8NDX5 983 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SLC35B2Q8TB61 432 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 DDI1Q8WTU0 396 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SLC44A1Q8WWI5 657 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 RBM17Q96I25 401 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 CATSPER2Q96P56 530 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 P2RX7Q99572 595 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 LXNQ9BS40 222 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 HERPUD2Q9BSE4 406 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 KLHL4Q9C0H6 718 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 S100A14Q9HCY8 104 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 BCAP29Q9UHQ4 241 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
PTPRR-203ENST00000378778 MRPL11Q9Y3B7 192 aaKnown RBP8.6□□□□□ -1.03
PTPRR-203ENST00000378778 FOXO6A8MYZ6 492 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 TRDMT1O14717 391 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 IRF6O14896 467 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 BUD23O43709 281 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 LSM8O95777 96 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ASLP04424 464 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 MYL2P10916 166 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 GLRA2P23416 452 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 CCNFP41002 786 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 PIK3CAP42336 1068 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 VPS41P49754 854 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SERPINB8P50452 374 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 DEUP1Q05D60 604 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 WDR44Q5JSH3 913 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SPOCD1Q6ZMY3 1216 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 PALM2Q8IXS6 379 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 KBTBD2Q8IY47 623 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 PLEKHO2Q8TD55 490 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 KAT5Q92993 513 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 TUBGCP5Q96RT8 1024 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ZNF577Q9BSK1 485 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 WDR18Q9BV38 432 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ANKEF1Q9NU02 776 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ARHGAP10A1A4S6 786 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 DENND3A2RUS2 1198 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 DENRO43583 198 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ABCB7O75027 752 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 FGFR1P11362 822 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 VAV1P15498 845 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 DESP17661 470 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 TBXAS1P24557 533 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 POLD1P28340 1107 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 RANBP1P43487 201 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 RPL5P46777 297 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 HSPA13P48723 471 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 FKBP1AP62942 108 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 BTKQ06187 659 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 HIC1Q14526 733 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 TTC39BQ5VTQ0 682 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 C4orf22Q6V702 233 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 B3GNT6Q6ZMB0 384 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 C15orf39Q6ZRI6 1047 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SH2D5Q6ZV89 423 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 THNSL1Q8IYQ7 743 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ABRAQ8N0Z2 381 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 NAT8LQ8N9F0 302 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 MARCH10Q8NA82 808 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 RPGRQ92834 1020 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SEMA4DQ92854 862 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 CBWD1Q9BRT8 395 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 IQCGQ9H095 443 aaKnown RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 UNC45AQ9H3U1 944 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 PI4KBQ9UBF8 816 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 ITGA11Q9UKX5 1188 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 DNPEPQ9ULA0 475 aa8.59□□□□□ -1.03
PTPRR-203ENST00000378778 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-203ENST00000378778 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
PTPRR-203ENST00000378778 COQ9O75208 318 aa8.58□□□□□ -1.04
PTPRR-203ENST00000378778 KRT37O76014 449 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms