RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 WARSP23381 471 aaKnown RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 RTN4RL1Q86UN2 441 aaPredicted RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 RHOT1Q8IXI2 618 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 SLITRK6Q9H5Y7 841 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 GDF3Q9NR23 364 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 ST7Q9NRC1 585 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 AMACRQ9UHK6 382 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 CDK7P50613 346 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 SIX1Q15475 284 aaPredicted RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 WSCD1Q658N2 575 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 PMF1Q6P1K2 205 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 ZNF598Q86UK7 904 aaKnown RBP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 NIPA2Q8N8Q9 360 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 PRELID2Q8N945 189 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 SLC35F5Q8WV83 523 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 LCMT1Q9UIC8 334 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 ESYT3A0FGR9 886 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 CASTOR2A6NHX0 329 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 E5RJQ4 531 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 PIK3R2O00459 728 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 GABBR2O75899 941 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 MYCP01106 439 aaPredicted RBP18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 POMCP01189 267 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 CCDC130P13994 396 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 TNFRSF8P28908 595 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 RGS7P49802 495 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 GUCY2DQ02846 1103 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 PIGHQ14442 188 aaPredicted RBP18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 LLGL1Q15334 1064 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 KCTD19Q17RG1 926 aaPredicted RBP18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 SENP8Q96LD8 212 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 HERPUD2Q9BSE4 406 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 EPB41L5Q9HCM4 733 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 PTPN22Q9Y2R2 807 aa18.31■□□□□ 0.52
THUMPD2-201ENST00000378727 GOLGA6L10A0A0M3HER8 536 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 GABRDO14764 452 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 HSPA6P17066 643 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 PDE4CQ08493 712 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 MTFR1Q15390 333 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 TRADDQ15628 312 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 UPP1Q16831 310 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 KATNAL2Q8IYT4 538 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 EMC1Q8N766 993 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 IPO4Q8TEX9 1081 aaKnown RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 FNIP1Q8TF40 1166 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 PGBD4Q96DM1 585 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 PIWIL1Q96J94 861 aaKnown RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 SLC4A5Q9BY07 1137 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 BHMG1C9JSJ3 638 aaPredicted RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 DNM1LO00429 736 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 FSCN2O14926 492 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 ATP8B1O43520 1251 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 SETSIPP0DME0 302 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 RPL9P32969 192 aaKnown RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 SSR1P43307 286 aaKnown RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 ATP13A4Q4VNC1 1196 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 FAM183BPQ6ZVS7 135 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 ARFGAP1Q8N6T3 406 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 AENQ8WTP8 325 aaKnown RBP18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 FAM53CQ9NYF3 392 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 HESX1Q9UBX0 185 aa18.3■□□□□ 0.52
THUMPD2-201ENST00000378727 C9IYK1 514 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 ATP2C2O75185 946 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 FAM163BP0C2L3 166 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 RARAP10276 462 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 SKIP12755 728 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 PSMA2P25787 234 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 ADORA2BP29275 332 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 GJC1P36383 396 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 TXNRD3NBQ6F5E7 133 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 ANKS1BQ7Z6G8 1248 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 FAM126BQ8IXS8 530 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 IFT20Q8IY31 132 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 ANKRD52Q8NB46 1076 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 CASKIN2Q8WXE0 1202 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 PLVAPQ9BX97 442 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 MAP2K7O14733 419 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 TTI1O43156 1089 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 PHF2O75151 1096 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 ACAT1P24752 427 aaKnown RBP18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 TKTP29401 623 aaKnown RBP18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 CARSP49589 748 aaKnown RBP18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 CYP1B1Q16678 543 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 TRNP1Q6NT89 227 aa18.29■□□□□ 0.52
THUMPD2-201ENST00000378727 TMEM110Q86TL2 294 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms